Erigeron canadensis (horseweed): 122579385
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Entry
122579385 CDS
T07610
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4-like
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ecad04812
]
122579385
Cytoskeleton proteins [BR:
ecad04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
122579385
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Katanin_con80
ANAPC4_WD40
NBCH_WD40
eIF2A
PROPPIN
WDR54
Motif
Other DBs
NCBI-GeneID:
122579385
NCBI-ProteinID:
XP_043607487
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Position
8:complement(42901237..42909273)
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AA seq
790 aa
AA seq
DB search
MASTKRAYKLQEFVAHESSVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNPILSLSGHS
SGIDSVSFDSSEDMVAAGAASGTIKLWDLDEAKIVRTLTGHRSNCISLDFHPFGEFFASG
SLDTNLKIWDIRRKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNSVKLWDLTAGKLLH
DFKFHEGQVQCIEFHPNEFLMATGSADKTVKFWDLETLELIGSAGPETSGVRCMQFNPDG
RTLLCGLNESLKVFSWEPIRTHDAVDVGWSKLLDLNMHEGKLLACSYNQSCVGVWVVDIS
ITEPNKVSKINGRQEQMPNSSGNASVLTENTPKTSSGRLSISQSSDPIVKETKSLGRLSV
TQNSELTNKDSKTFSSTGNVPQKMYPNIVQKISPTGSISSPSAPAVLKRSGAKSQSTQNV
SSTFSRLDVAPVIVPRNNVDSRREGLPGRVTPTMVMSKPPDSRKLSNIKDEAEKPPSSVQ
SVTDASDIDSSRVADGISFNSLKDSAFGKTAKGTGFEDDRCVVSGKPEPNVVTESLPSNQ
IEIYEGRLPRPVRDTYSMESKRRGRTRTLVSTWDRKERSSYHESLSSRNLPDSVSAVNML
PSSVKQLSEPTKETQPVTEEDALAEIMGRHDQFVSSMQSRLAKLQMIHRCWDRNDIKGAI
RAMERMADHAVTADIVSLLTGKIDSITLDICSCLLPLLTSLLDSDMDRHRGVSLELLLKL
VRIFGSVIYSSLQASSSVGVDIEAEQRLERCNLCYLELEKVKHSLALLTRRGGSIAKSAH
ELNLALQEVS
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggcttctacaaaacgtgcttataagctacaggaattcgtagctcatgaatcaagtgta
aattgtttaaagattgggaggaagtcttcgagagtacttgttactggtggagaagatcat
aaggttaatctatgggctatcggaaaaccgaatcctatcctgagcttgtctggccattca
agtggaattgattcagtaagctttgattcttctgaagacatggtagctgctggagctgca
agtggtactattaagttgtgggatttagacgaggcaaaaattgttcgcactcttactggt
catcgatccaattgcatatctttggactttcatccgtttggggagttttttgcttctggg
tccctggacacgaatttaaagatatgggatattaggcgaaaagggtgtatacatacatat
aagggtcacacacggggggtcaatgcaataagatttacacctgatggtcgttgggtggta
tctggtggagaggacaacagtgtgaagctatgggatttaacagccggaaagctattacat
gatttcaagtttcatgaaggccaggtccaatgtatagaatttcatccaaatgagttcttg
atggccacaggttctgctgataaaactgttaaattttgggaccttgagaccttggaactt
ataggttctgctggtccagagactagtggagttcgttgtatgcaattcaatcctgatggg
agaacccttctatgtggtctgaatgaaagtctgaaggtgttttcatgggaaccaatcaga
actcatgatgctgtggatgtgggatggtcaaagttgttagatcttaatatgcatgaaggg
aagcttctcgcctgttcttacaatcaaagctgtgtaggagtttgggttgtagatatatcg
ataactgaaccaaataaggtttccaagattaatggtcgtcaagaacaaatgcccaactca
agtggaaacgcttcagttcttactgagaataccccaaaaaccagttcaggcaggctatcc
atttcacaaagttcagatccaattgtgaaggaaacaaaatcattgggtaggctttcagtt
actcaaaattcagagctgaccaacaaggattctaaaaccttttcatccacaggaaatgtc
cctcaaaagatgtatccaaatattgtccaaaagatcagcccaacgggttcaatttcgtct
ccaagtgccccggcagttttaaagcgaagtggtgcaaagagccagtcaacacaaaatgta
tcatcaacttttagtagattagatgttgcacctgtaattgtgcctagaaacaatgttgat
tcaagaagagaaggtcttcctggaagagtgacaccaacaatggtaatgtcaaaacctcca
gattctcgaaagctctcaaatataaaggatgaagcagaaaagccaccatcttctgtgcag
tctgtgactgatgcaagtgacattgattcaagtcgagttgctgatggaattagtttcaat
tcactgaaagactcggcttttggaaaaactgcgaaggggacaggctttgaagatgacaga
tgcgtggtttctggaaagccagaaccgaatgtagtgacagagtcacttccaagcaaccag
attgaaatttatgaaggacgtctgccccgaccagttagagatacttactctatggaaagt
aaaagaagaggaagaacgcgtacacttgtttctacttgggacaggaaagaaaggtcttct
tatcatgagagtctctcttccagaaatctccctgatagcgtctctgccgtcaacatgcta
ccaagttctgtgaaacaattatctgaacctactaaggaaactcagcctgttacagaggaa
gatgctcttgcagagataatgggacgacacgatcagtttgtatcttcaatgcagtctcgt
ctagcaaagctacagatgattcatagatgctgggataggaatgatattaaaggagcaatt
agagcaatggagagaatggctgatcatgctgtaactgcagatatagtgagccttttgaca
ggaaaaatagactccatcaccctggatatttgctcttgtctgctgcctcttctcaccagt
ctccttgatagtgacatggataggcatcgaggagtatcgttagaattgttgcttaagctg
gtgcggatatttggttctgtgatttattcgtctttacaagcgtcatcctctgttggtgtt
gacatcgaggcagaacaaaggctggaacgttgcaacctctgctatctagagcttgaaaag
gtcaagcattccttggcactcctaaccagaaggggcggatcgattgccaagtcagcgcat
gagttgaatcttgcacttcaagaagtctcatga
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