Erigeron canadensis (horseweed): 122579480
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Entry
122579480 CDS
T07610
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG2-like
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122579480
Enzymes [BR:
ecad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122579480
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122579480
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Copine
zf-C3HC4_3
vWA-TerF-like
zf-C3HC4
zf-C3HC4_2
zf-RING_2
Sina_RING
zf-Di19
zf-RING_5
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
122579480
NCBI-ProteinID:
XP_043607597
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All DBs
Position
8:37268794..37272575
Genome browser
AA seq
473 aa
AA seq
DB search
MGGKNSREEGSRYRHSSSFQSNSGYPQFQPSYSFPTTQAEQTSYPVEEEPSYPSTSSYGT
QQQPPYPYNNRPQKKLDKKYSRIADTYTSLEQVTGALGRAGLESSNLIVGIDFTKSNEWT
GKMSFNRKSLHHIGDGFNPYEQAISIIGKTLAAFDEDNLIPCYGFGDASTHDQDVFSFYP
EDRFCNGFEDVLSRYREIVPHLKLSGPTSFAPVIEQAMTIVEQSAGQYHVLLIIADGQVT
RSVDTEHGRLSPQEQRTVDAIVEASKLPLSIVLVGVGDGPWDMMKEFDDNIPDRAFDNFQ
FVNFTEIMSKNVPTIRKETEFALSALMEIPSQYKATIELNLLGGRKGISPQRVALPPPIR
GPSSYSSPKPSYSTSFQKGSEPYYDYGHSSPVYSTPLYGHSNPVHSTPLYGQTSPDHTTL
SKSTYDNQLCPICLTNVKNMAFGCGHQTCHECGETLQLCPICRSLIETRIKLY
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggggggtaagaattcaagagaagaaggatcaagatataggcattcttcgtcgtttcag
tcgaattctggttatccgcaatttcagccatcttattcatttccaacaacacaagcagag
caaacaagttatcctgttgaggaggagccatcgtatcctagtacttcatcatatggaaca
caacaacaaccaccttatccttataataataggccacaaaagaagcttgacaaaaaatat
tcaaggattgcagatacttatacctctttagaacaggtgaccggggctcttggacgtgct
gggctcgagtcatccaacctcattgttggtatcgacttcactaagagcaatgagtggaca
ggtaaaatgtctttcaacagaaaaagcttgcatcatataggagatggttttaatccttat
gaacaagctatatccatcattgggaaaacgttagccgcttttgatgaggataacttgatt
ccatgttatggatttggagatgcatcaacccatgatcaagatgttttcagtttttatcct
gaagatagattttgtaatggattcgaggatgtcttgagtagatacagagaaattgtccct
catttaaagctttcaggaccaacatcttttgccccggtcattgaacaagctatgacaatt
gttgaacaaagcgcgggccagtatcacgttctactaatcattgctgatgggcaggtaaca
agaagtgtggataccgagcatggtcgattgagtccacaagaacaaagaacagttgatgcc
atagttgaagcaagcaagcttccactatctattgtattagtcggggttggagacgggcct
tgggacatgatgaaggaatttgatgataacatccctgatcgtgccttcgataatttccag
tttgtcaactttacagaaatcatgtcgaagaatgtgcctacaatacgaaaagagacagaa
tttgctctttcggcattgatggaaatcccttctcagtataaagcaacgattgaattgaat
ttactaggtggtcggaaaggaatatcccctcagagggtcgcccttccccctccaatccgt
ggaccatcctcctatagcagcccaaaaccatcatattcgactagttttcaaaaaggctca
gaaccttattatgattatggccatagcagtcctgtttattctactcctttatatggccat
agcaatcctgttcattctactcctttatatggccaaactagtccggatcacaccacactt
tcaaaatctacctatgacaaccagctatgccccatctgccttactaacgtaaagaacatg
gcctttggttgtggacatcagacatgtcacgaatgtggagaaacgcttcagttgtgccca
atttgccgaagtttaattgagactaggataaagctatactaa
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