Erigeron canadensis (horseweed): 122579498 Help Entry 122579498         CDS       T07610                                  Name (RefSeq) vacuolar sorting protein 39-like   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism ecad  Erigeron canadensis (horseweed) Pathway ecad04148   Efferocytosis Brite KEGG Orthology (KO) [BR:ecad00001]  09140 Cellular Processes   09141 Transport and catabolism    04148 Efferocytosis     122579498  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:ecad04131]     122579498 Membrane trafficking [BR:ecad04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     122579498 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Vps39_1 CNH zf-Vps39_C Clathrin zf-HC5HC2H DUF2175 Motif Other DBs NCBI-GeneID:  122579498 NCBI-ProteinID:  XP_043607613 LinkDB All DBs Position 8:complement(6877741..6890056) Genome browser AA seq 1007 aa AA seqDB search MVHNAYDSLELLSNCPNKIDAVESYNSNLLIACSDGSLRIYVPQSSTSSSSSSPPPSDRH QAETLDLKKEAYVLERTVNGFSRRPMVAMEVLDSRELLLSLSESISFHKLPNLETLAVIT KAKGANAYSWDDKRGFLCFARQKRVCIFRHDGGRGFVEVKEFGVPDYVKSMSWCGDNICL GIRREYTILNATNGALTEVFPSGRIAPPLVVSLPSGELLLGKDNIGVLVDQNGKLLQEGR ICWSEAPAIVVIQKPYATALLPRHIEIRSLRVPYALIQTVVLRDVRLIHQGKNAVIVALN NSVYGLFPVPLGAQIVQLTASGNFEEALALCKLLPPEDSNLRASKEQSIHVRYAHYLFEN GSYEEAMEHFVASQVEITYVLALYPSILIPKSSLVGEPDKLLDVSGEVYLSRASSGLSDD MDPSSTSHLLEYDESSALESKKMSHNTLMALVKFLQKKRNHIIGKAAAEGTEEAISDAVG HSFVSYESNRVKRSNKGRVNIPLDSGAREMAAILDTALLQALLLTGQSAAALDLLKGLNY CDLKISEEILRNGNHYLCLLELYRGNSLHREALTLLHNLIEESKSDEPKIELSQKFKPEM IIEYLKPLCVIDPMIVLEYSMLVLESCPTQTIELFLSGNIPADLVNSYLKQHAPSMQATY LELMLSMNENGISGNLQSEMVQIYLSEVLEWYADLTAQKKWDEKVYTPARKKLLSALEGI SGYTPEILLKRLPTDALFEERALLLGKMNQHELALSIYIHKLHVPDMALSYCDRVYESGL HQQPAKAPGNIYLTLLQIYLNPQRTTKDIEKRINNLVSSPSPKVSWTSLKGKGRGLGKKI ADIEGAEDTRISLSGTDSGKSDGDGDGDEEAISNIMLDEVLDVLSQRWDRVQGAQALKLL PKETKLQNLLPFLGPLLRKTSEAHRNYSVIKRLRESENLQTKDQLYSQRKVDVKITADSM CSLCNKKIGTSVFAVYPNGNTIVHFVCFRDSQNMRASGKGSALRRIR NT seq 3024 nt NT seq  +upstreamnt  +downstreamnt atggtgcacaacgcttacgattctctagaactactatccaactgtccaaacaaaatcgac gccgtcgaatcctacaattcaaatctactcatcgcttgttcagacggatctcttcgaatc tacgttccacaatcttccacgtcatcatcatcatcatcaccaccaccgtcggatcgtcat caagctgaaaccctagatttaaaaaaagaagcttacgtattagaaagaacagttaatgga ttctcaaggagacctatggtggcaatggaagtgttggattcaagagaattattgctttcg ctttcggaatcgatttcgtttcataaacttcctaatttggagactcttgcggttattacg aaagcgaaaggagcgaatgcgtattcgtgggatgataagagagggtttttgtgttttgct agacagaaaagagtttgtatttttagacatgatggaggacgtggatttgtggaggtgaaa gagtttggtgtaccggattatgtgaagtctatgtcttggtgtggagataatatatgctta gggattaggagagagtatactatactgaatgctacgaatggtgcattaacggaggtgttt ccgtcggggaggattgctccacctttagttgtgtctcttccatccggagaacttcttcta gggaaggataacattggagtgcttgtggaccaaaatggcaagctcctccaagaaggcagg atttgttggtctgaggctccagcgatagttgtcattcagaagccatatgctacagctctt ctaccaagacatattgagatacggtctttaagagtcccttacgccttgatacaaacagtt gttcttcgtgatgtccgccttattcaccaaggaaagaatgctgtaattgttgctttaaac aattctgtttacggattatttcctgttcctcttggagcacagattgtacaattgacagcc tctggaaattttgaggaagccctggcattatgtaagttgctgccacccgaagattcaaat ctccgagcctcaaaggagcagtcaattcatgtaagatatgcacactatctgtttgaaaat gggagttatgaggaggccatggagcactttgtggcatctcaagtagaaataacatatgtg ctggctttatatccatctattcttatccccaagtcgtctctggttggtgaaccagataaa cttcttgatgtcagtggagaggtgtatttatcaagagcctcgtctggtttgtcagatgat atggatccttcttcaacttctcatctactggaatatgatgagagttcagctcttgagtca aagaaaatgtctcacaatactttaatggcactcgtcaagttcctgcagaagaagaggaac cacataatcggaaaggcggctgctgagggaacagaagaggccatttcagatgctgttggg cattcctttgtttcatatgaaagcaaccgtgtcaagagatcaaacaagggcagagtcaac attcccctggactctggtgctagagagatggctgcaatattggacactgcacttctccag gccctgcttctgactggacagtctgctgctgctttggatttactaaaaggactcaactat tgtgatttgaaaatatccgaggagatattacgcaatggaaatcactatttatgtttgtta gagctttacagaggcaactcactacatcgtgaagctctcacacttcttcataacttaatt gaggagtccaaatcagatgaaccaaaaattgagctcagccaaaagttcaagccggagatg ataatcgaatatctcaaacctttgtgtgtgattgacccaatgattgtactggaatattcg atgcttgttcttgaaagttgtccgacacaaactattgagctcttcttatctggaaacatt ccagcagatttggttaactcatacttaaagcagcatgctccgagcatgcaggctacatac ttagagttgatgctgtcaatgaatgaaaatggcatctctgggaatctgcagagtgaaatg gtgcaaatatatctttcggaagtgcttgaatggtatgctgatctcactgctcagaaaaag tgggatgagaaagtttataccccagcaaggaaaaagctcttgtcagcattggagggtatt tcaggatatactccggagattttgttgaagcgactaccaacagatgctctatttgaagaa cgggcactcctactagggaaaatgaaccagcacgaacttgcattgtccatatatattcat aagcttcatgttccagacatggcactgtcctactgtgatcgggtgtatgagtcagggctt catcaacagcctgcaaaagctcctggcaacatatacctaactttactacaaatctatctg aatccccagagaactacgaaagatattgaaaaaagaatcaataatctagtttcatctcca agtccaaaggttagctggacatcacttaaaggtaaaggaagagggttaggtaagaaaatt gcggatattgaaggtgcagaagataccagaataagcctaagtggtacagatagtgggaaa agtgatggtgatggtgatggggatgaggaagcgatttccaatatcatgctagatgaagtg cttgatgttttgagccagaggtgggaccgagtccagggagcacaggccctcaagctctta cctaaagagactaagctacagaacttacttccgtttcttggacctcttctgagaaaaacc agtgaagcacaccgcaactattctgtcattaagagactcagagaaagtgaaaacctccag actaaagatcaactatacagccaaagaaaagtggatgtgaagatcacagctgacagcatg tgttccctttgtaacaagaagataggaaccagtgtttttgccgtctatcctaatggaaac acaatcgtgcattttgtttgctttcgtgattctcagaatatgagagctagtggaaaagga tcagcgctaaggagaataagataa

DBGET integrated database retrieval system