Erigeron canadensis (horseweed): 122579503
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Entry
122579503 CDS
T07610
Name
(RefSeq) Golgi SNAP receptor complex member 1-1-like isoform X1
KO
K08495
golgi SNAP receptor complex member 1
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
122579503
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122579503
Membrane trafficking [BR:
ecad04131
]
SNARE
SNAP-25[N] (Qb)
Gos1 (Gos28)
122579503
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
V-SNARE_C
Sec20
Tektin
Bap31_Bap29_C
COG5_N
SKA1
P22_AR_C
DUF7801
Orf78
PIN_8
Motif
Other DBs
NCBI-GeneID:
122579503
NCBI-ProteinID:
XP_043607621
LinkDB
All DBs
Position
1:51941063..51948406
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AA seq
222 aa
AA seq
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MDTPSSWDSLRKQARNLEAELDDQMHMYRKLVSNKVDDGNNEGNLGSSIEQLLKQLQQVI
SQMQAWVSSGGSEIFSHTLTRHHEIHHDLTQEFNRLRSSLRAKREHASLLEDFREFDRAR
LDIEEGGGSQEQSLLKERATLMRNTGQMDGVISQAQETLGSLVLQRSTFRGVNSKLSNVS
SRLPTVNSIISAINKKKSMDTIILSLVASVCMFLILIYWLTK
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atggatacaccaagctcttgggattccttaaggaaacaggcaaggaatcttgaagcagag
ttggatgatcaaatgcatatgtatcgtaaactggtgtctaacaaagttgatgatggtaat
aatgaaggtaatcttggttccagcatagaacaactacttaaacagctacaacaagtgata
tcacaaatgcaagcctgggtgtcatctggtggatcagaaattttttcacatacattaact
cgacatcacgaaattcatcatgatcttactcaggagtttaatcgacttcgttcgagcctc
agagctaagagagagcatgcatcactgcttgaagatttcagggagtttgacagagcaagg
ttagatatagaagagggtggtgggtctcaagagcagtctcttcttaaggagcgtgctact
ctcatgagaaatacagggcagatggacggtgtaatatctcaagcgcaagagaccctcggt
tcacttgtgcttcaaaggtcaacatttagaggcgtaaattcaaagcttagcaacgttagc
agtcggctccccactgtgaatagcattatctctgcaataaataaaaagaagtctatggac
accataattctttctctagttgcatccgtttgtatgtttctgattttgatctactggttg
accaaatag
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