Erigeron canadensis (horseweed): 122579759
Help
Entry
122579759 CDS
T07610
Name
(RefSeq) rhamnogalacturonan I rhamnosyltransferase 1-like
KO
K23280
rhamnogalacturonan I rhamnosyltransferase [EC:
2.4.1.351
]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ecad01003
]
122579759
Enzymes [BR:
ecad01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.351 rhamnogalacturonan I rhamnosyltransferase
122579759
Glycosyltransferases [BR:
ecad01003
]
Polysaccharide
Structural polysaccharide
122579759
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
O-FucT
Motif
Other DBs
NCBI-GeneID:
122579759
NCBI-ProteinID:
XP_043607922
LinkDB
All DBs
Position
8:2271272..2275005
Genome browser
AA seq
517 aa
AA seq
DB search
MCCSRLVESNEKKEQLKKLNEKMGGCVTTFTSVSGEGNKGDKSMVLSQPKMIMWMTRGMT
SLLLWICVVQLLTVGEVWGPRLLKTWPSCYTPSPSHITNTNNIHSSSFLESKVSLPPKRV
YKNNGYLIVSCNGGLNQMRAAICDMVAVARYLNVTLIVPELDKSSFWADPSDFEDIFDVD
HFITSLRDEVRILKELPPRLKRRVELGKFHSLAPISWSDISYYHNQILPLIRKYKVVHLN
RTDARLANNGLSLDIQKLRCRVNFSGLRFTSQIEELGRKVVNILRKTGPFLVLHLRYEMD
MLAFSGCTQGCNSDEVEELTRMRYAYPWWKEKEIDSDLKRKEGLCPMTPEETALILRALR
INRNIQIYIAAGEIYGGERRMASLAAEFPNLVRKESLLDPLELGFFQNHSSQMAALDYYV
SLESDIFVPTYDGNMARVVEGHRRHLGFKKTIRLDRKVLIDLIDRYSEGSMNWDEFSNIV
QEVHADRMGRPRRRMTISDRPKEEEYFYANPYECLDS
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgtgttgtagtagattagttgaaagtaatgaaaagaaggagcagttgaagaaattgaat
gaaaaaatgggtggttgtgtaacaacatttacaagtgttagtggagaaggtaataaagga
gataaatcaatggttttgtcacaaccaaaaatgataatgtggatgacaaggggaatgaca
agtttgttgctatggatatgtgttgttcagttattgactgttggtgaagtttggggtcca
agattgttgaaaacttggccttcttgttatacaccttctccttcacatattactaatact
aataatatccattcttcttcttttttggaatctaaagtttctcttcctcctaaaagggtt
tacaagaacaatggttatctaatagtatcttgcaacggcgggctaaatcaaatgcgagca
gcaatctgcgacatggttgcggttgctagatacttaaatgtgacactcattgttccagaa
ttggataagtcatcattttgggctgatccaagtgactttgaagatatttttgatgttgat
catttcatcacatccttgagagacgaggttcgtatattgaaagagcttcccccgaggctt
aaaagaagagttgaacttggaaaatttcattctttagcaccgattagttggtctgacatt
tcatattatcataatcagattcttcctcttatccggaagtataaagttgtacacttgaac
agaaccgatgctcgacttgccaacaatgggctctctttagatattcaaaaacttcgttgt
cgagtaaatttcagtggtttgagattcacttcacagattgaggaattaggtagaaaagtg
gtaaacatcctaaggaaaaccgggccttttttagttcttcaccttagatatgaaatggat
atgttggctttctcgggctgcacacaaggctgcaacagtgatgaagtagaagaattgact
agaatgagatatgcttatccatggtggaaagagaaagaaattgattctgatcttaaaaga
aaagaagggttgtgtcccatgacaccggaagaaactgctctgattttgcgtgcattgaga
atcaatcgtaatattcaaatttatattgctgcgggtgaaatctatggtggtgaaagacgc
atggctagtttagctgcagagttcccaaatttggtgcgaaaggagagtctcctggatcct
ttggagcttgggttctttcaaaaccattcgtcacagatggctgcacttgattactacgtc
tctttagaaagcgatatttttgtcccaacgtatgacggaaacatggctcgagtagttgag
ggtcatagaagacatttagggtttaagaagacaattcggcttgacagaaaggtcttgatt
gacttgatagatcgatacagtgaagggtcaatgaactgggatgaattttcaaacatagtc
caagaagtccatgccgatcgaatgggacgcccaagacggcgaatgacgatttctgatcgg
ccaaaggaagaagaatacttctatgcaaatccatacgagtgcctggattcatga
DBGET
integrated database retrieval system
