KEGG   Erigeron canadensis (horseweed): 122579939
Entry
122579939         CDS       T07610                                 
Name
(RefSeq) F-box protein SKP2A-like
  KO
K03875  F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    122579939
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ecad04121]
    122579939
Ubiquitin system [BR:ecad04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     122579939
SSDB
Motif
Pfam: LRR_6 LRR_At5g56370 LRR_4 F-box-like F-box LRR_At1g61320_AtMIF1
Other DBs
NCBI-GeneID: 122579939
NCBI-ProteinID: XP_043608141
LinkDB
Position
8:complement(28770929..28776026)
AA seq 360 aa
MMKGGGDELEVRFDNLMVGVGRVIRDWNEIPMELLLRIVSLLDDHRTVVVASAVCLGWRH
ALSSGLTHFSFSWCKNNMNNLVNSLAPKFKNLRSLSLRQDKPQLYDNALETIANNCHDLE
DLDLSKSFKLTDQSLYALAHGCPNLVKLNVSGCSSFSDNALADLSGYCRKLKVLNLCGCV
KGASDSALKAIGYNCSQLQSLNLGWCEDVGDAGVMSLAYGCPDLRALDLCGCVLITDESV
IALANNCLHLSSLGLYYCQNLTDRAIYALAQSRLKNKNQVWDSVKSSSYKDEGLMKLNIS
QCTALTPPAVQALCDSFPALHTCPGRHSLIISGCLNLTSVHCACAFQAHRAVKTVTHQAY
NT seq 1083 nt   +upstreamnt  +downstreamnt
atgatgaaaggtggtggtgatgagttggaggtgcgatttgataacttgatggtgggagtg
gggagagtgatcagagattggaacgagataccaatggagctattgttaaggattgtgtcg
ttgttggatgatcatcgtacggtggttgttgcttctgctgtttgtcttggttggagacat
gctttgtcttcagggcttactcatttctcattctcttggtgcaaaaacaacatgaataac
ttggtgaattctcttgctcccaagttcaaaaacttgaggtctctgagtcttcgtcaagat
aaaccacagttatatgataatgccttagagacgattgcaaataactgtcacgacttggag
gatcttgacctcagcaagagctttaaactcaccgatcaatctttgtatgctttggctcat
ggttgtccaaaccttgtgaagctcaacgtcagtggatgctcttcatttagtgataatgcc
cttgcggatctcagtggttattgtagaaaattaaaagtcttgaatctttgtggatgcgtt
aaaggtgcatctgatagtgccttgaaggcaatcggatataactgcagtcaactccagtca
ttgaatctgggatggtgtgaggatgttggcgatgctggagtaatgagtttagcatatggc
tgccctgatcttcgtgcacttgacttgtgtggttgtgttcttattacagatgaaagtgtg
atagccctggcaaataactgcttacatttgagttctctgggtctctactactgtcaaaat
ctcacagatcgggctatatacgctttggcacaaagtcgacttaagaacaagaaccaggtg
tgggattcggttaaaagcagcagttacaaggatgaagggctcatgaaactgaacatcagt
caatgcaccgccttaacgccacctgctgttcaggcactatgtgattcatttcctgcactc
catacatgccccggtaggcactctctcattataagtggatgcttgaatttaacttccgtc
cattgtgcatgtgcttttcaagcacatcgggcagtcaagacagttactcatcaagcatat
tga

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