Erigeron canadensis (horseweed): 122579964
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Entry
122579964 CDS
T07610
Name
(RefSeq) long chain base biosynthesis protein 2a-like isoform X1
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00600
Sphingolipid metabolism
ecad01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
122579964
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ecad01007
]
122579964
Enzymes [BR:
ecad01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
122579964
Amino acid related enzymes [BR:
ecad01007
]
Aminotransferase (transaminase)
Class II
122579964
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_5
Motif
Other DBs
NCBI-GeneID:
122579964
NCBI-ProteinID:
XP_043608165
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Position
8:34540874..34544151
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AA seq
490 aa
AA seq
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MITIPYSAAFSTYFCYVSGFIYGQLLDFLRNLVDWWNATNLDQGYAPILLGLEGFYVRHF
YLRMQDCFGRPISSPPDAWFDMVERVSNNKNKTLKRTTKVSRCLNLGSYNYLGFASTDEF
CTPRVIESLKKYSVSTCSTGADGGMTALHTELEKAVADFVGKLAAIVTGMGYVTNSAILP
VLIGKGGLIISDSLNHNSIINGARGSGATIKVFQHNTPSHLENLLRESIINGQLRTHRPW
KKIIVVVEGIYSMEGEICKLPEIVSICKIYKAYVYLDEAHSIGTIGKTGRGVCELLDVDT
ADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSMSLPAAQQIISSIKVIL
GEDGSSRGAQKLAKVCENSNYFRSELQKLGFVVLGDYDSPVIPIMLYNPTKIPAFSRECL
KWNVAVVVVSFPVTPPLLARARICISAAHTHDDMVKALEVISKVGDMVGIKYFPAELKKP
QLEESRVTME
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgatcacaattccgtattcagctgcattttctacttacttctgctatgtatccgggttc
atatatggtcagctgcttgatttcttacgtaatctggttgattggtggaatgctaccaat
cttgatcagggttatgcaccaatattgttaggacttgaaggtttttacgttcgtcacttc
tatctccgtatgcaggattgttttggacgacctatatcaagccctcctgatgcttggttt
gatatggtggagcgcgtttccaacaataagaacaagactctaaagcggactacaaaagta
agcaggtgtcttaacttgggctcgtacaactaccttggatttgcctcaacagatgaattc
tgcacgccccgtgtaattgagtctttgaagaaatactctgtaagcacatgcagtactggt
gctgatggaggcatgacggccctgcatactgaactggaaaaggcggtggctgattttgtt
ggaaaactggcagctatagttactggcatgggttatgtcactaattctgctatccttcct
gtcttaattggaaaaggagggttgattattagtgattctctgaaccataactctataata
aatggtgctcgagggtcaggtgctacgattaaagtatttcagcataacacgccatctcat
ttggagaatctattgagagaaagcattattaatggacaactgagaacgcatagaccttgg
aagaaaatcattgttgtcgtggaggggatatatagtatggaaggggaaatttgcaagctt
cctgaaattgtttccatttgtaaaatatacaaggcatatgtgtatttggatgaggctcac
agtattggaacaattgggaaaacaggcagaggtgtctgcgagcttttagatgtagatact
gcagatgttgatataatgatgggaactttcacaaaatcatttggatcatgcggtggttat
atagcaggatcaaaggaacttattcaatatttgaaatatacttgtcctgctcatctatat
gcgacgtccatgtcacttcctgctgcacaacaaattatatcttccataaaagttattctt
ggagaggatggctctagtcgaggtgctcagaagcttgctaaagtctgcgagaacagcaac
tattttagatcagagcttcagaaactgggctttgtggttttaggggattatgactcaccc
gttatacctataatgctttacaatcctacaaaaatccctgctttttcaagagaatgtctc
aaatggaacgtagctgttgtcgtcgtatcttttccggtcacccctccactgttggctaga
gcccgtatatgcatttctgctgctcatacacacgacgacatggtcaaagccttggaggtt
ataagtaaagttggtgacatggttggcataaagtattttccagctgaacttaagaagcca
caacttgaagaaagcagagttacaatggagtag
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