Erigeron canadensis (horseweed): 122580099
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Entry
122580099 CDS
T07610
Name
(RefSeq) protein NEDD1
KO
K16547
protein NEDD1
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecad03036
]
122580099
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ecad04812
]
122580099
Chromosome and associated proteins [BR:
ecad03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
122580099
Microtubules and associated factors
gamma-tubulin ring complex
122580099
Cytoskeleton proteins [BR:
ecad04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
122580099
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40
WDR55
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_RFWD3
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_DCAF4
NYD-SP28_assoc
WD40_like
PAN2_N
Motif
Other DBs
NCBI-GeneID:
122580099
NCBI-ProteinID:
XP_043608311
LinkDB
All DBs
Position
1:29314797..29320659
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AA seq
756 aa
AA seq
DB search
MSFSDPAMSLLAASGGDTVKLFDVSVDPGDPCILSHTPSPGSQVNSVKWNHTNLVVASAG
DDKKISLWRKNGQSMGTIPSAGADSGDNVEESIFTINFSTKASRYICSGGSGQVVKIWDL
QKRRCIKWLKGHTDTITDVKYNCKDEHLASISLSGDLIIHNLGSGARATELKDPNGQVLR
VLDYSRISRHLLVTAGDDGSVHLWDTTGRSPKVSWLKQHSAPTSGVSFSPSNDKMIASVG
LDKKLYTFDSGSRRPSFCIPYEAPFSSVAYRDDGYTLAAGTTTGQVVFYDVRGKPQPFTV
LRAYANSEAVTSLCWQRSKPLLVNEKSCTPDMALMGGTVDDSIVMPDPLPSATTSTTSMI
GSRSSARPGPSPESATSVTTSANDPYAGEETPLRSSVRAGGLPRLHAPRGYNHKDDMEVF
SPLVEVQPITPSFDKLFEDKKSFLLFPSSKRLPLSTDVGSDPQSSFDWKPPSTLMQDANR
TPVFQPTSSPVSSTTDESPSITPPEAWGGQRASENIARLRHGSSRFSTLASSSSSGSMMA
GLQDLSLPLSQTGINFRVRDNSSSQESLLAYSDAPFGSSISLGMRGNMESSGSALTQTRR
PSSYAERISTTPSFSDGTANAVGSPKLKKTGAETREDLLNSFTPRHEISAVTEAAIPPLL
NGMDTQPQRAPLQPNSQQGSSFSLQLFQGTLDEALGSFQKSIHEDVRNLHIEVLRQSHMR
EMEMSNAMSSILEAQAELMKEIKYLRKENQELRRLL
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcagtgatccagcaatgtcgttattggccgctagcggcggcgacaccgtgaaa
cttttcgatgtatccgtggatcccggagatccttgtattctcagtcacacgccttcgcct
ggctctcaagttaattctgttaaatggaatcatactaatttggtggtggcaagtgccggc
gacgataagaagatatcgttatggcgaaaaaacggtcagagtatggggactattccgagt
gctggtgctgatagtggtgacaatgttgaggagtctatattcactatcaactttagtacc
aaggcgtctcgttacatttgttcgggtggaagtggtcaagttgtgaaaatatgggatttg
cagaaaaggaggtgtataaagtggttgaagggtcatacagacacaattacagatgtcaag
tacaattgcaaagatgaacatttagcttctattagtcttagcggtgatcttattattcac
aaccttggttcgggtgcaagggctactgaactcaaagatcctaacgggcaggtcctgagg
gtgcttgattattcacggattagcaggcatcttttggtgacagctggtgatgatggttct
gttcatctctgggatacaaccggtcgcagcccaaaggtctcctggttaaagcaacattcc
gcaccaacttctggtgttagtttttcaccatcaaatgacaagatgatcgctagtgtagga
ttagataaaaagctgtacactttcgattcaggatcaagaagaccctcattttgcattccc
tatgaagcaccgttttcttcagtggcatatagagatgatggatacacactggcagctgga
acaactacaggccaggtggtattttatgatgtccgaggaaaaccacagccgtttactgtt
cttcgtgcttatgctaattctgaggctgtcacaagtttatgctggcaaagatcaaagcca
ttgttggtgaatgaaaaaagttgcacacctgatatggccctcatgggaggtactgtggat
gattcgatcgtgatgccagatccacttccatcagcaaccacatctactacttcaatgatt
gggtcccggagttctgctcgtcctggtccctccccagaatctgccacctcagtaacaact
agtgctaatgatccatatgcaggagaagaaacaccgctgagaagctcagtaagagctggt
ggattgcctagattacatgccccacgtggttataatcacaaggatgacatggaggtgttt
tctccacttgtagaagttcaaccaatcacaccgtcgtttgataaattgtttgaagataag
aagtcttttctgttgttcccttcatcaaagagacttcctctttcaacagatgtgggtagt
gatcctcagtcaagttttgattggaagcctccctcaactttgatgcaggatgccaaccga
actccagtctttcaaccaacatcttctcctgtatcctcaacaaccgatgaatcgccttcc
attactccaccagaagcttggggcggtcagagagcgtctgaaaatattgctcggctacgg
catgggagttctcgtttttccacattggcatcttcttcaagttctggatccatgatggct
gggcttcaagatcttagtttgcctttaagccagacgggtattaatttccgagtcagggac
aactcttctagtcaagagagtcttttagcctattctgatgccccgtttggttcatcaata
tcgcttggtatgagaggcaatatggaatcttctggatcagcgttgacccaaacacgaaga
ccttcaagttatgctgagagaataagcaccactccatcctttagtgacgggacagccaat
gctgtggggtccccaaaacttaagaaaacaggagctgaaacaagagaagatcttttgaat
agctttacaccaaggcatgagatctcagctgtcacggaagcggctattcctccattgttg
aatggtatggatacacaaccccagagagcacctttgcaaccaaattcacagcagggatct
tccttctcacttcaactattccaaggcactcttgatgaagctcttggttcatttcagaaa
tccattcacgaggatgttagaaatctacatatagaagttcttaggcaatctcatatgcgc
gagatggaaatgtcaaatgcaatgagctcaattttggaagcacaggcagagcttatgaag
gaaatcaagtatttacgcaaggagaaccaggaactccgacggctattgtga
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