Erigeron canadensis (horseweed): 122580148
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Entry
122580148 CDS
T07610
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecad03036
]
122580148
Chromosome and associated proteins [BR:
ecad03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
122580148
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
NPHI_C
Motif
Other DBs
NCBI-GeneID:
122580148
NCBI-ProteinID:
XP_043608355
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Position
8:complement(25175635..25187858)
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AA seq
718 aa
AA seq
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METEDWDLSAEELDALERDALNLIAQRKTAAAGTTTSSGTGSTLPPSNFYNNNNFNNNST
QSKSQFTPSSSVSSSAAPVFGCDRKFNSLPTASGNPPVDTTRSLSGDDCSKSRPKLSIKF
FLHASGNIAAKFVYNEVLVGALRKVPKATWNAKERLWLFPLSSLCSAEKIVGELTGFNIE
IETLDALLKRAIAAASAVPDLRDRYEEMPVGLESKLLPFQRDGVRFVLQHGGRVLLADEM
GLGKTLQAIAVAACVRDAWPVLVLTPSSLRLQWASMIKQWLDIPSSDILVVLSGYGGSNK
CGFTIVRSNAKGNLRLDGVFNIVSYDAVQKLQGTLMSSDFKFVIADESHFLKNGLAKRTI
SSLPILQKAQYTLLLSGTPALSRPIELFKQLEALYPNVYKSVKEYGSRYCQGGIFGMYQG
ASNHEELHNLMKATVMIRRLKKEVLTELPVKRRQQVFLDLADKDMKRVNTLFCELEVIKS
KIKACKSEEEGQSLKFEEKRIINELYRESAQAKIPAVLDYLGTVIEAGCKFIVFAHHQPM
IDEMHQFLLKKKVGCIRIDGGTPAGSRQSLVTDFQEKDTIKAAVLSIKAGGVGLTLTAAS
TVIFAELSWTPGDIIQAEDRAHRIGQVSSVNVHFLLANDTVDDIIWDVVQSKLENLGQML
DGHENLLEVSYNPSKFSPAKQKTLEPKCSPGKQKTLDSYMKRCNSFNSEQSYPKHPRH
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgaggactgggacttgagcgctgaagaactggacgcccttgaaagagacgct
cttaatctcatcgctcaacggaaaaccgccgctgccggtaccactaccagctccggcacc
ggtagcactctccctccttcaaacttttataataataataattttaataataattccact
caatcaaaatcacaattcactccttcttcttcggtatcgtcatccgccgccccggttttc
ggttgtgatcgcaagtttaattcattgccaactgcgtcagggaatccgccagtagacaca
actcgcagtttatctggggatgattgttccaagtctcgaccaaaattgtccatcaaattt
tttttacatgctagcggaaacattgctgcaaaatttgtgtataatgaggtacttgtggga
gcattacgtaaggttccaaaagcaacttggaatgcgaaagaaagattgtggctattccct
ttgtcgtctttatgttcagcagagaaaattgttggtgaattaactggttttaacattgag
attgaaactttagatgcgttgctgaaacgtgctattgctgctgcttctgctgttccagat
cttcgagaccgttatgaggagatgcctgttggccttgaatcaaagctgttgccattccag
cgagacggtgttaggtttgtattgcagcatggtgggcgtgttctcttggctgatgaaatg
ggtcttggaaagactcttcaggctatcgctgtagccgcttgtgtccgtgatgcgtggcct
gttcttgttcttaccccatcttcattgcggcttcaatgggcttctatgattaagcagtgg
ctagacataccttcgtcagatatacttgtggttttgtctggttatggtgggtcaaacaag
tgtggattcacaatagttcgatcaaacgccaagggaaatttacgtctagatggggtattc
aacattgtatcatatgatgccgtgcagaagcttcaaggaacgctaatgagttcagatttt
aagtttgtgattgctgatgagtcacactttctaaagaatggcctagcaaagcgaactatt
tcgtctcttcccatattacagaaagctcaatacacattgttgcttagtggaactccagct
ttatctcgaccgatcgagctttttaaacagcttgaagcattgtatcctaatgtatataag
agtgttaaggaatatggaagccggtattgccagggtggtatatttggaatgtatcaaggt
gcaagtaatcatgaggaattgcacaatttgatgaaagcaactgtgatgattcgtagatta
aaaaaggaagttctgactgagttgcctgtgaagcggaggcaacaggttttcttggacttg
gcagacaaggacatgaaacgagttaatactttattctgtgagttggaggtgattaaaagc
aaaatcaaggcctgtaaatccgaagaggaaggtcagtcgcttaagtttgaagagaagcgt
ataataaatgagctctatagagagtctgcacaagctaaaatccctgctgttctggattac
ctcggaactgtcattgaggcagggtgcaagttcattgtatttgctcatcaccagccaatg
atcgatgaaatgcatcagtttcttctgaaaaagaaggttggttgtattcggatagatggt
ggtactccagcaggatcaagacaatccttggttacagattttcaggaaaaagacactata
aaagcagcagtgctttctatcaaagctggtggcgttgggttaacattaactgctgcaagc
acagtgatatttgcagagctttcatggactccaggagatattattcaagctgaagaccgt
gctcataggattggccaggtgtcatcagtgaatgtacactttcttctagcaaatgacacg
gttgatgatatcatttgggatgttgtgcaaagcaagttagagaatctgggacagatgctg
gatgggcatgagaatttattggaagtttcgtataacccgtcaaagtttagcccagctaag
cagaaaacgttggagccaaaatgtagccccggtaagcagaaaacattggactcatatatg
aagcgttgcaattcattcaactccgaacagtcttaccccaaacatccaaggcactga
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