Erigeron canadensis (horseweed): 122580269
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Entry
122580269 CDS
T07610
Name
(RefSeq) AMSH-like ubiquitin thioesterase 3
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122580269
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ecad01002
]
122580269
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122580269
04121 Ubiquitin system [BR:
ecad04121
]
122580269
Enzymes [BR:
ecad01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122580269
Peptidases and inhibitors [BR:
ecad01002
]
Metallo peptidases
Family M67
122580269
Membrane trafficking [BR:
ecad04131
]
Endosome - Lysosome transport
Others
Others
122580269
Ubiquitin system [BR:
ecad04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
122580269
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JAB
USP8_dimer
Prok-JAB
Motif
Other DBs
NCBI-GeneID:
122580269
NCBI-ProteinID:
XP_043608481
LinkDB
All DBs
Position
8:complement(23702153..23708846)
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AA seq
507 aa
AA seq
DB search
MRPPMININAMARKIDVDNRIPIRNYYRIADNLLKQAHIYREEKNIIDLYVMLLRYSSLV
MDTIRFHRDYLTLCSEERRYSKKQLRVVIEELESLKSEVDRHVDGLNKCHTSSEEYQTNG
HGGTAHRSGDSSFQLPPVNNTLSFSPDDKQLHQRESALSWNQNLGSTPNNQSGSINMQFQ
KLSLLPTPRQETLSRHSLLGPNGLRGQLSNPSAQIKVQYPTYSDFNSNDNLSLVQSVQSD
ITGVKDGNSGVDISTMESVLSLDDGRWSRPVVEEFDEDFFLSGNIRQPSPPPVRARLQPE
HSHIPPSRVADPRPGPANSFQDDSPTSNTYQHLHIPVKMMQDFLRLAQQNTKRNLETCGV
LAGSLKNRTFQITTLIIPKQESTSDSCQTLNEEDIFDVQDKRSLFPLGWIHTHPSQRCFM
SSVDLHTHYSYQIMLPEAIAIVMAPTDESSPHGIFHLSDPAGVNLIRNCDQRGFHPHEEP
DDGSPIYEHCSHVYMNEIMNFDVVDLR
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgagaccgccgatgatcaacatcaacgccatggctcggaagatcgacgtcgataatcga
attcctattcgcaattattaccgcatcgccgataatcttcttaaacaggcacacatatat
cgagaggagaagaatattatagatttgtatgttatgcttctaagatattcaagcttggta
atggatactataagatttcatcgtgactacctaactttatgttcagaggaacgaagatat
agcaagaagcaattacgtgtggtgatagaggagctggaatctttgaaatcagaagttgat
cgtcatgtagatggcttaaacaagtgtcatactagtagtgaagaatatcaaacgaatggc
catggaggaaccgcacataggtcaggagattcttcttttcaactgcctcctgtcaataac
acactttcttttagccctgatgataagcagcttcaccagagggaaagtgcgctctcctgg
aaccagaaccttgggagtacaccaaataaccaatctggttccattaacatgcagttccaa
aagctatctcttctgccaactcctagacaagaaactttatcgagacattctcttctaggt
cctaatggtcttcgtggtcaattgtcaaatcctagtgcccagataaaggtgcaatatcca
acatatagtgatttcaattcaaatgataatttgagcttagttcaatctgtgcaaagtgat
atcactggtgtcaaagatggaaattcgggagtggacatatcaacgatggaatcagtgctc
tctttagatgatggtagatggtcacgtccagttgtggaagagtttgatgaagattttttt
ctttctggaaatatcaggcaaccttctccccctcctgtgcgtgctagattgcaaccagaa
catagtcatattcctccatcacgagttgctgacccaagacctggacctgcaaactcattc
caagatgattcacccacttctaatacctatcagcatttacatattcctgtgaagatgatg
caagattttttgagattggcgcaacaaaatactaaaagaaacttggaaacatgcggagtt
cttgctggttctttgaaaaacaggactttccagatcaccacgcttattatacctaagcag
gagtcaacttctgactcgtgtcagacattaaatgaagaagatatattcgatgttcaggac
aagcgttctttattccctcttggatggattcatacgcatccatcccaacgctgcttcatg
tcatcagttgatctgcacacacattactcatatcagattatgcttccagaagcaattgca
attgtaatggcccctacagatgaatccagcccacatggtattttccacctttctgaccct
gctggagtaaatctgattcggaactgtgatcaacgtggttttcatcctcatgaggaacca
gatgacggtagcccaatttatgaacattgttctcatgtttatatgaacgagattatgaac
ttcgatgttgtagatcttcggtga
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