Erigeron canadensis (horseweed): 122580349
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Entry
122580349 CDS
T07610
Name
(RefSeq) denticleless protein homolog A
KO
K11790
denticleless
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122580349
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
122580349
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Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_TEP1_C
Beta-prop_DCAF4
MIOS_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_DCAF12
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_Nup120_160
WD40_RFWD3
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
122580349
NCBI-ProteinID:
XP_043608556
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Position
8:complement(37090800..37094676)
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AA seq
509 aa
AA seq
DB search
MVRSSNRSVFHNITSRELIGFRVRKRPCFEGESSQYTELGGFDYGLEDDITPPMSLSFCK
TAKNAHILAVTGEDGYVCLYNTRLKFSSLSTSAENREKARVFEWLAHDNAIFDVCWIKDD
TNLLTACGDHSIKVWDSQEKKCIEVLTGHTGSVKSISGHPSNNDIIVSGSRDGSFALWDL
RYCKRTRANAASATIAIVQGAHVSPSVKMRGRNTKAASMSVTSVLYLKDEVSIATAGAAD
SVVKFWDTRNLKAPITQACCQDMPSPKWARSYGISSLSQDLNGVYISASCMDSSIHLFNV
LQLDKGPVKSFKGCDIGTFFVKAKLSPDAGHILSGSSDGFAYVWQVNKPQVDPIKLEGHD
AEVTAVDWCSYEMGKIATCADDSVVQLWNINSSCYSTTRSPSSIRRREKTLPGIKRRKLF
TDEETNDQVNGDEPDSSAEPPLKVDSPDLISVPEMRTPESLKKQISKSHIIETCERSPDT
SFGSPSSVLNPPPSLKRKTILDYFVAPSS
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggtgagatcatcaaacagatctgtctttcataacatcacttccagagagctcattggc
ttcagagtacgaaagcgaccgtgtttcgagggcgaatcgagtcaatatactgaactcggg
ggttttgattatggacttgaagatgatattactcctcctatgtctttatccttttgcaag
acagcaaagaatgctcatattttagccgttactggtgaagatggatatgtttgcttatat
aatactcggctaaagttttcttctttatcaactagtgctgaaaatagagagaaagccagg
gtatttgagtggcttgctcatgataatgctatttttgacgtttgttggataaaggacgat
acgaatttactaaccgcttgcggtgatcattctattaaagtatgggactctcaagaaaaa
aagtgtattgaagtactaactgggcacactggaagtgtgaaatccatcagtggccacccc
tctaacaatgatattattgtatctggttcaagagacgggtcctttgctttgtgggacttg
aggtactgtaaacgtacacgagcaaatgccgcatctgcgacaatagcaattgttcaaggt
gctcatgtttcaccaagtgttaaaatgcggggtagaaataccaaggctgcttccatgagt
gttacatccgttctttatttaaaagatgaggtttccattgctaccgctggagcagcagac
agtgttgttaaattttgggatacaaggaatcttaaagctccaattactcaggcttgttgt
caagatatgccatcaccaaaatgggcaagatcatatggcatatccagcttgtctcaagat
ttaaatggggtatatatttcagcttcatgtatggacagcagcatacatctcttcaatgta
cttcaacttgataaggggccagttaaaagtttcaaaggatgtgatattggtacatttttt
gtcaaggcaaagttgagccctgatgcaggtcatatacttagtggttctagcgatggattt
gcctatgtatggcaggtaaataaacctcaagtagatcctattaaacttgaaggccatgat
gctgaagtaacagcagtagattggtgttcatatgagatgggtaaaatagctacatgtgca
gatgattctgtggtccagctttggaacattaacagcagttgctattcaactacaagatct
ccttcatccattcgaaggagagaaaaaactcttccagggattaagcgtcgaaagcttttt
acagatgaagaaacaaacgaccaagttaatggggatgaacctgattcttcagccgaacca
ccattgaaggttgactctccagatctaatatcagttcctgaaatgagaactcctgaatca
ctcaaaaaacagatatcaaagtcacacatcattgaaacatgtgaaagatccccagataca
agttttggcagcccttcctctgtgctgaatcctccaccctctttaaaaagaaaaaccatt
ttagattattttgtggccccttcatcatag
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integrated database retrieval system