Erigeron canadensis (horseweed): 122580401
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Entry
122580401 CDS
T07610
Name
(RefSeq) vesicle transport v-SNARE 13-like
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
122580401
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122580401
Membrane trafficking [BR:
ecad04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
122580401
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec20
DUF5964
DUF4332
Spectrin
DUF668
DUF5798
MSC
Motif
Other DBs
NCBI-GeneID:
122580401
NCBI-ProteinID:
XP_043608604
LinkDB
All DBs
Position
8:complement(1516962..1520100)
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AA seq
220 aa
AA seq
DB search
MSETFEGYERQYCEISATLSKKCTSASLLDGEQKKQKISEVKAGIDEAEALIRKMDMEAR
SLPPNVKAVLLAKLREYKSDLNNLKSEVKRIASTNLNQAARDELLEAGMTDVSAVSADQR
GRLLMSTERLNKSSDRVRDSRRTMLETEELGVSLLQDLHQQRQSLLNAHGNLHGVDENIS
KSKKIMTNISRRMSRNKYIIGFMVAILVIAIILILYFKLK
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaacatttgaaggatacgaacgacaatactgcgaaatttccgcaactctgtcc
aagaaatgcacttctgcttctttacttgatggagagcaaaagaagcagaaaatatctgaa
gtaaaagctggaatcgatgaagcagaagctctgattcgaaaaatggacatggaagcaaga
agcttgccacctaatgtaaaggctgtgctccttgccaaattaagagaatacaaatcagat
cttaataatttgaagagtgaagttaaacgaattgcatcaacaaacttaaaccaggctgcc
cgagatgaattgttggaagcaggaatgacagatgtatctgcggtgtcagcagaccaaaga
ggaagattactaatgtcaaccgaaagattgaacaagtcaagtgatagagttagggacagt
agaaggaccatgctggagactgaagaactcggggtttcacttctccaagatcttcaccaa
caaagacagtctctcttgaatgcccatggaaatcttcatggagttgatgagaacataagc
aagagtaaaaagattatgaccaacatttcaagaaggatgagtcgaaacaaatatataatt
ggcttcatggttgccatacttgttattgccatcatcttgattttgtacttcaagctaaag
tag
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