Erigeron canadensis (horseweed): 122580402
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Entry
122580402 CDS
T07610
Name
(RefSeq) E3 ubiquitin-protein ligase RZF1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122580402
04121 Ubiquitin system [BR:
ecad04121
]
122580402
Enzymes [BR:
ecad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122580402
Membrane trafficking [BR:
ecad04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
122580402
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122580402
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
FAR1_N
zf-CHY
DUF7129
Anti-TRAP
PRC2_EED_ins
HypA
Zn_ribbon_RPAB4
Motif
Other DBs
NCBI-GeneID:
122580402
NCBI-ProteinID:
XP_043608605
LinkDB
All DBs
Position
8:46355353..46356526
Genome browser
AA seq
357 aa
AA seq
DB search
MPPDHTLASNDQFIEIGGPTNQLYWCYQCHQTVRIASNDNSQIMCPRCFGQFIYEINIAR
PRLVVDFTEFDPSPEARLLEALSLMLDPPARQTSRQNEGLTDVGIQPPWRRRRVSRDSPF
DDMDGWGPESGILARPRAPSRSWIILTPNNLPARVPHSRNPNHNNNNNNNDNDNNSVVPR
GVDPRNYFGGTGLNELIEELTQDDRPGPLPAPDSAINRLPNIKITETHLLNDSQSCAVCM
EDFKVGGEAKELPCNHIFHSNCIVPWLRLHNSCPICRNGLPVPIITTNGTTYSSSSDDDD
MYSSSIDSRGRRRQVGYRCRGLASVWPFQPRRQRTSSHGRVNVSSREESRLNSCNIL
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgccaccagaccataccttggcctctaatgaccaattcattgagatcggtggcccaact
aaccagctctattggtgttatcaatgtcatcaaacagtaagaatagcgtctaatgataac
tcacaaataatgtgtcctaggtgcttcggccagttcatctatgaaatcaacatagccagg
ccacggcttgtggttgacttcactgaatttgacccctcgcctgaagcccgtttgctagaa
gctctctcgctcatgcttgatcctcctgctcggcaaactagcagacaaaacgaagggctt
acggatgttggaatccaaccgccatggaggcgacgtagggtgagtagggactcacccttt
gatgacatggatgggtggggcccagagtctggaattttagcacgacccagggccccatca
cgctcttggattattctgacaccaaataacctccctgctagggttcctcacagtaggaac
cctaatcataataataataataataataatgataacgataacaatagtgtggtgccaaga
ggggttgatcctagaaactattttggtggaaccgggttaaacgagttgattgaagagttg
actcaagatgaccgaccaggcccattacccgcaccagattccgctattaacagattacca
aatattaaaattacggaaacacatctactcaatgactcacaatcttgtgcggtttgtatg
gaagattttaaagttggtggagaagcaaaagagttgccatgtaatcatatctttcattca
aattgtattgtcccatggttaagactacataactcatgtcccatatgtcgaaatgggttg
cccgtgccaatcatcaccacaaacggaacaacttattcttcctcttctgatgatgatgat
atgtattcttcgtccatcgatagtaggggaaggcgacgacaagttggttacaggtgtcga
ggattagcgtctgtgtggccctttcaaccgaggcgccaacgtactagctcacatggtcgt
gttaacgtttcaagtcgtgaagaatccagactaaactcgtgtaacatcctgtag
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