KEGG   Erigeron canadensis (horseweed): 122580431
Entry
122580431         CDS       T07610                                 
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog
  KO
K22544  deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    122580431
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ecad03400]
    122580431
DNA repair and recombination proteins [BR:ecad03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     122580431
SSDB
Motif
Pfam: HD HD_assoc_2
Other DBs
NCBI-GeneID: 122580431
NCBI-ProteinID: XP_043608642
LinkDB
Position
1:complement(978758..984350)
AA seq 473 aa
MGAFRNGNGGDNTASPSMEDQRLWKHVHDNVHGNIYLDPLALKFIDTEQFQRLRDLKQLG
LSHMVYPGAVHSRFEHSVGVYWLAGTAVEKIKAHQGLELDIDHSDIQTVKLAGLLHDVGH
GPFSHLFEREFLPQVIEGSTWSHEDMSLHMIDYMVDEHYIDIDSERLKKVKDMIMAASEK
AVKPVQTSREKVFLYDIVANGRNGIDVDKFDYIVRDSRACGLGCNFQFERLLDTMQVIDN
EICYRAKEYLTVHKLFYTRADLHRTVYTHAKVKAIELMFVDALVKADNYLHISSYIRDPS
QYWKLDDSILKTIETAEADELKESRDLIRRIRRRDLYQFCNEFTVPKDKLDHFKRITAQD
IICSQKSGGVSLREEDLAVSNVKIDLTKGRNNPLESINFFEDYNSKEKFTISKDQISNLL
PAYNQDLIVRVYSKKPELVEVVSEAFENFQVKTYGVKAQVHGTPERKRRRIFS
NT seq 1422 nt   +upstreamnt  +downstreamnt
atgggagctttccgtaacggtaacggaggtgacaacactgcttcgccgtcaatggaggat
caacgcttgtggaagcacgttcacgataacgttcacggcaacatttatctcgatcctctt
gctctgaaatttatcgacactgagcagttccaaaggcttcgggatctgaagcaacttggt
ctatcacacatggtatatcctggagcagtacattctcggtttgagcattcagttggtgtt
tattggcttgctggtactgcagttgaaaaaatcaaggcacatcaggggttagagcttgac
attgatcactcagatatacagactgtaaaacttgctggtttattgcatgatgtcggtcac
gggccattcagccatttgtttgaaagagaatttcttcctcaggttattgaaggctctaca
tggtcccatgaagatatgtctttgcacatgatagactacatggttgatgaacattacata
gatattgattctgaacgcctgaagaaagtgaaggacatgatcatggctgcttctgaaaag
gctgtaaaacctgtgcagacttcaagagagaaggttttcttatatgacattgttgcaaat
ggtcgaaatggcatagatgttgataaattcgattatattgtccgtgactctcgagcttgt
ggtcttggctgcaactttcagtttgaaaggctgttggatactatgcaagtcatagacaat
gaaatctgctatcgtgccaaggaatatctgacggtccataagttgttctacacccgtgct
gatctgcaccgcacagtctatacacatgctaaagtgaaggctattgaactcatgtttgta
gatgctcttgtaaaggcggataactatcttcatatttcatcatatattcgagacccatct
cagtactggaagttggacgattcaatattgaagacgattgaaactgcagaggctgacgag
cttaaggaatcaagagatctaattcgaagaattcggagaagggacttgtatcagttctgc
aatgagtttaccgttcccaaggataagttggaccatttcaaacgtatcactgcacaagat
atcatttgttcacagaaatctggcggggttagtctaagagaagaagatctagcagtgagc
aatgtcaaaattgatttgacaaaagggagaaacaatcctcttgaaagcatcaacttcttt
gaggattataatagcaaagagaaattcacaattagcaaagatcagataagtaacttgctg
cctgcatataatcaggacttgatagtgagagtgtactccaagaagcctgaactggtggaa
gtagtttctgaagcattcgagaatttccaagtaaagacatatggagtgaaagcgcaagta
catggaactcctgaaaggaaaaggcgcaggatcttctcgtga

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