Erigeron canadensis (horseweed): 122580439
Help
Entry
122580439 CDS
T07610
Name
(RefSeq) pectinesterase
KO
K01051
pectinesterase [EC:
3.1.1.11
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00040
Pentose and glucuronate interconversions
ecad01100
Metabolic pathways
Module
ecad_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122580439
Enzymes [BR:
ecad01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
122580439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectinesterase
PMEI
STALD
FliS
Talin_R4
Motif
Other DBs
NCBI-GeneID:
122580439
NCBI-ProteinID:
XP_043608646
LinkDB
All DBs
Position
8:complement(45703834..45705718)
Genome browser
AA seq
561 aa
AA seq
DB search
MNDVKKKFTLIGLGVVLLAATVIGAGFLIKMYSGHAHDAEQDDSIATTSKAVDSLCQHTD
YKQSCHKSLANASDTDDPKELVKMAFDSAIKEVQIAMDNSTTLKELAKDPRASKALDQCK
EVLNTSIDDLKRSLQKLDNFDVARMEEYVNDLKIWLSGSLTYQETCREGFKNTTGEAGEK
MKKLLRLGWKLTSNGLAMINGIGELLGEFQLTGVSRRLLDKFPNDDAWWARGERRLLLDV
DPKTLKPNAVVAKDGSGKFKTIKEAVQTVPKKNVQPFVILIKQGIYKEYVEIPRRVNNII
FIGEGPTKTRITGNIGYNDGITTYKTATVAVNGDGFMAKDIGFENTAGPQKHQAVALRVS
GDMAIFHNCAMDGYQDTLYAHAYRQFYRQCTITGTIDFVFGDAAAIFQDCKMIVRKPLDN
QACMVTAQGRKDRNSKGALILEGCTITAEPAYMATQPMPKSYLGRPWKEYSRTIIMQSFI
DRHIVPDGWSPWLGTFGLDTCYYGEFNNRGPGANTAQRVKWKGIKKISLQEATSYTPGKF
LLGDLWVKATGVPYNPGMMNV
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacgtgaagaaaaagttcacattgattggacttggcgtcgtcctattagcagcc
acggtcattggtgcaggttttcttatcaaaatgtattcgggtcatgcacacgatgcagaa
caggatgattccattgcaacgacaagcaaggccgtggactcgctttgccaacatacggat
tacaagcagtcatgtcataagagtcttgccaatgcaagcgacacagatgaccccaaagag
cttgtgaagatggcttttgattctgcaataaaggaggttcaaatagccatggataactca
acaaccttgaaagaattggccaaggaccccagagcttctaaggcattggatcaatgcaaa
gaggttctcaatacctctattgatgatcttaagagatctttacaaaagctagataacttt
gatgttgccaggatggaggaatatgtgaatgatcttaagatatggcttagtggttcgtta
acttatcaagaaacgtgtcgtgaagggttcaagaacacaactggtgaagcgggtgagaag
atgaagaagttattgagattagggtggaagctcacaagtaatgggctcgccatgattaat
ggtattggtgagctccttggggagtttcagctaaccggggttagtcgtaggttactagac
aagtttccaaatgatgatgcatggtgggctagaggtgagaggcggttgcttcttgatgtt
gatccaaagacattgaagccaaatgctgttgtggctaaagatggttcgggcaagtttaag
accatcaaggaggccgtccaaacagtgcccaaaaagaatgtgcagccatttgttatccta
atcaagcaaggtatttacaaggaatacgtggaaatccctcgacgtgttaataatatcatc
ttcataggagaaggtccaacgaaaacaaggatcaccggaaacataggttacaatgatgga
attacgacttacaagactgcaactgttgcggtgaatggagacggtttcatggctaaagac
atagggtttgagaacactgcagggccacaaaagcatcaagcagtcgcccttcgtgtctct
ggtgacatggctatctttcacaactgtgccatggacggatatcaagacacgctttatgcc
cacgcatatcgccagttttaccgccaatgcaccatcactggaaccattgatttcgttttt
ggtgacgctgcagccatcttccaagactgcaagatgatagtaagaaagccccttgataac
caagcatgcatggtgacagcccaagggcgtaaggatcgcaactcaaaaggcgccttaatc
ctcgagggctgcaccattacagctgaaccagcctacatggccacccagccaatgccaaaa
tcctacctaggccgcccgtggaaagaatactctagaaccataatcatgcagtcattcatc
gaccgacacattgtccctgatgggtggtccccgtggcttggaacattcgggctggacacg
tgttattatggtgaatttaacaatagagggccaggggctaatacagcccaaagggtaaaa
tggaaggggatcaagaagattagcctgcaagaggctactagttacactccagggaaattt
ctattaggagatttatgggtcaaggcaactggtgtcccttataatcctggcatgatgaat
gtctaa
DBGET
integrated database retrieval system
