Erigeron canadensis (horseweed): 122580543
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Entry
122580543 CDS
T07610
Name
(RefSeq) tetratricopeptide repeat protein 27 homolog
KO
K24935
tetratricopeptide repeat protein 27
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ecad04990
]
122580543
Domain-containing proteins not elsewhere classified [BR:
ecad04990
]
Other domain-containing proteins
Tetratricopeptide repeat-containing proteins
122580543
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_16
TPR_14
TPR_19
TPR_8
TPR_11
TPR_CcmH_CycH
TPR_17
TPR_12
TPR_10
TPR_9
TPR_15
PPTA
ANAPC3
FAT
Luteo_P1-P2
TPR_20
Motif
Other DBs
NCBI-GeneID:
122580543
NCBI-ProteinID:
XP_043608749
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All DBs
Position
8:39490810..39493689
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AA seq
851 aa
AA seq
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MAEQILRTYELRLLQCTLSPPQTQTQAQIPISNHPLQTSIETLIQSIESGQYSKTLTLEF
APFLTNPSFSVTDFINSLETHQKDSIFRLFSVIPLAVSAFLGFVQSNVTGPPVTLPPLFS
NLGKDDLEIWARNEVMSSGSDLLGKFLNLEYFVFAKLLLLQVRDYLKENEKDVIFQTVSL
WLARVLLVQQKMLDGHSSVLFEKLQELGNETLDHLGNLEKVSKYWLGVEEWVLREVVSMV
HLELGIIGFRYGRVDSSKARLELAEKVSGLSISVSGSLGYRTVHQVDPKAQRRLIVDGSG
FRNGVSDDASSTNGVSDGNGSQHDQQVHEVSDVLLTPRFIGQTNEGSESLSPVQQALILA
QCLLIEKNTPHDVMQRWDMAPYIEAIDSQPSSLFIIRCICDLLRIRWEKTRSRTKERTIL
MMDKLVQSVYESSPEVTERMRCCFGVDLPTIPTLRKEYADLLVSCGLIGEAVKIYEDLEL
WDNTIFCYRLLEKKAAAVELINTRLLERPNDPRLWCSLGDVTNKDLYYEKALEISENKSV
RAKRSLARSAYKKGEYEKAKLLWESAMAINSMYPDGWFALGAAALKARDVDKALDAFTRA
VQLDPDNGEAWNNIACLHMAKKRNKEALIAFKEALKFKRDSWQMWENYSQVAADIGNFSL
ALEATQKVLSMTNNKRIDVKLLDSIMLEIEGKNNEHVESIVNGVGELQLGKTRETEHLTE
LIGKVLQQIAKSGGGGEIWGLFARWHKLKGDLTMCSEALLKQVRSYQGSELWKDKERFVK
FAQASLELCNVYVEIGARDGGRRELSAAEMHLKSTIKQAALRFSDTDEYMSLQTLLESVQ
AMLQASSVTSA
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atggcggaacaaatccttcgcacctacgagcttcgtcttcttcaatgcacgctttcaccc
ccccaaactcaaacccaagcccaaatccccatttccaatcaccccttacaaacttcaatc
gaaaccctaattcaatcaattgaatcaggccaatattccaaaaccctaacccttgaattc
gctccctttcttacaaacccgtcattttcagtcacagatttcatcaattcgttagaaacc
caccaaaaagattcaatctttaggctatttagtgtaatcccacttgcagtttctgccttt
ttgggttttgttcagtcaaatgttaccgggccgcctgtaacgcttcctccgttattttcg
aatcttggtaaagatgatttggaaatttgggctagaaatgaggtaatgtcttccgggtct
gatttattaggaaagtttttgaatttggaatattttgtttttgctaaattattattgtta
caagttagagattatttgaaagaaaatgagaaagatgtgatttttcagacggtttcgttg
tggttagctagggtgttgttagttcaacagaagatgcttgatgggcattcctcggttttg
tttgagaagttacaggagttgggtaatgagactttggatcatttaggtaatttagagaaa
gtgtcgaaatattggctgggggttgaagaatgggttttgagggaggttgtgtctatggtg
catttagaattggggattattggttttaggtatggacgtgttgattcttcaaaagcgcgt
cttgagttggctgagaaagtgtctgggctttctatttctgttagtggttcgttgggttat
cggactgtgcatcaggtggatccgaaagcacagcgtcgtcttattgttgatggttcaggc
tttagaaatggggtttctgatgatgcgagctctacaaatggtgtttctgatggtaatggt
tctcagcatgatcagcaggttcatgaagtgtctgatgtgttgttgactccgagatttata
ggacaaactaatgaaggttctgagagtttgagcccggtccaacaagcattaattttggca
caatgtcttttaattgagaaaaatactcctcatgatgtaatgcagaggtgggatatggcg
ccatatatagaggcaattgattcacagccatcttcgttgttcattattagatgtatttgt
gacttgttacgtataagatgggagaaaacccgtagcagaactaaggagcgcactatttta
atgatggataaattggttcaaagtgtttatgaatcttctcctgaagtaacagagcgaatg
cgttgctgttttggtgttgatttacctactattcctactcttcgtaaggaatatgcagat
ttgttggttagttgtgggttaataggtgaggctgtgaaaatctatgaggatcttgagcta
tgggataatacgatattttgttaccgtttattggaaaagaaagctgctgctgtagaatta
ataaatacccgtcttctggaacgacccaatgacccaagattatggtgttcacttggcgat
gttacaaacaaagatttatactatgagaaagcattggaaatctcagaaaacaagtcagta
agggcaaaacggtcacttgcacgaagtgcatacaagaaaggggaatatgaaaaagcgaaa
ctcttatgggaatctgctatggcgataaattctatgtacccagacgggtggtttgcgctt
ggtgctgctgctttgaaggctcgggatgttgataaagcattggatgcttttacacgtgct
gttcagcttgatcctgataatggtgaggcatggaataatattgcttgtttgcacatggcc
aaaaagcgaaataaggaggcattaattgctttcaaggaagccttgaagttcaaaagagat
agctggcagatgtgggagaattacagtcaagttgcagcagatattggcaacttcagtctt
gcgttggaagcaacccaaaaagtgttgagtatgactaacaataaaagaatcgacgttaag
ttattagatagtataatgcttgaaattgaagggaagaacaatgagcatgttgaatctatt
gtaaatggtgttggagaattacaattaggaaaaacacgagaaactgagcacttaacggag
ttgattggtaaagttctgcagcaaattgccaaaagtggaggagggggagaaatttgggga
ttgtttgcaaggtggcataaactgaaaggagacctcacaatgtgctcagaagcgttatta
aagcaagtaagatcataccaagggtctgaactgtggaaagacaaggaacggtttgtgaag
tttgctcaagcctctttggaactctgtaatgtttatgtagaaattggtgcacgcgatggt
gggcgtcgagaactttctgcggccgagatgcatctcaaaagtactattaaacaggctgct
ttgaggttttcagataccgatgaatacatgagcctccaaactcttcttgaaagtgtgcaa
gcaatgttacaggctagttcggtaacttctgcataa
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