Erigeron canadensis (horseweed): 122580583
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Entry
122580583 CDS
T07610
Name
(RefSeq) syntaxin-112
KO
K08486
syntaxin 1B/2/3
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
122580583
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122580583
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecad04147
]
122580583
Membrane trafficking [BR:
ecad04131
]
SNARE
Syntaxin (Qa)
Stx-PM
122580583
Exosome [BR:
ecad04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
122580583
Exosomal proteins of other body fluids (saliva and urine)
122580583
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
RPW8
Enkurin
DUF5847
Syntaxin_2
TINF2_N
Motif
Other DBs
NCBI-GeneID:
122580583
NCBI-ProteinID:
XP_043608788
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Position
8:complement(7218799..7219958)
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AA seq
298 aa
AA seq
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MNDLMTKSFLTYVDLKKQTQLDIKSEERDLEMGIQEPEINPSDETHLSKFFQEVESIKST
MEEITSLFSDLQTLNEETKSAHSAKVIRGLRDRMESDMVAVLRKASFVRVRLEYLESSAT
HKQNTAVGRTQVSVTNGLKVKLKEMMNNFQELRDKIVSDHKEYLKRRYYNETGEYPSEEM
METMASGDGKMFEVSDGKTDVVMENKERHQAVLDIKRSLNKLHQVFLDMAVLVETQGEKL
DDIEDNVAKAGSFVSGGTDSLFYAKQLKDKQRCHCWMCLIWALVIIILLVCFIAMMSS
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatctaatgacaaaatcgtttctaacttatgtggatttgaagaaacaaacccaa
ctcgacatcaaatcagaagaaagagatctcgagatggggattcaagaacctgagattaat
ccatcagatgaaactcatctttctaaattcttccaagaagttgaatcgatcaaatccacc
atggaagagattactagtctgttttctgatttgcaaactttaaatgaagagacgaaatct
gctcacagtgccaaagttattcgtgggttaagagacagaatggaatctgatatggttgca
gtactgagaaaggcaagttttgttcgtgtgcgtcttgaatatctagaatcttctgcaaca
cacaaacaaaacactgctgtggggagaactcaggtttcagtcacaaatgggcttaaagtt
aaactcaaagaaatgatgaataattttcaagagttaagagataagatagtttcagatcac
aaagagtatcttaaaagaaggtattacaatgaaacaggggaatatccgagtgaggaaatg
atggaaacaatggcttcgggagatggaaaaatgtttgaagtgtctgatgggaagacagat
gtggttatggagaataaagaaaggcatcaagctgtgttggatataaagagaagtttgaat
aaacttcatcaagtgtttcttgatatggctgttttggtggaaacacaaggggagaaattg
gatgatattgaagataatgtggcaaaagccggaagctttgtaagtggtggaacagacagt
ttgttttatgctaagcagttaaaggataagcagagatgtcattgttggatgtgtttgatt
tgggcgttggtgataattatattgttggtatgcttcattgctatgatgtcttcttga
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