Erigeron canadensis (horseweed): 122580902
Help
Entry
122580902 CDS
T07610
Name
(RefSeq) myosin-6
KO
K10357
myosin V
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
122580902
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecad03019
]
122580902
04131 Membrane trafficking [BR:
ecad04131
]
122580902
03029 Mitochondrial biogenesis [BR:
ecad03029
]
122580902
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ecad04812
]
122580902
Messenger RNA biogenesis [BR:
ecad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
122580902
mRNA cycle factors
P-body specific factors
122580902
Membrane trafficking [BR:
ecad04131
]
Others
Actin-binding proteins
Myosins
122580902
Mitochondrial biogenesis [BR:
ecad03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
122580902
Cytoskeleton proteins [BR:
ecad04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
122580902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
Hpr_kinase_C
AAA_22
TSC22
Motif
Other DBs
NCBI-GeneID:
122580902
NCBI-ProteinID:
XP_043608982
LinkDB
All DBs
Position
9:complement(6029287..6046622)
Genome browser
AA seq
1502 aa
AA seq
DB search
MAAVSLGIGSLVWVEDLDDAWIDGEVIGVTGEEIKVASTSGKTVVAKSSNVYPKDAEAPP
CGVDDMTKLAYLHEPGVLNNLRSRYDINEIYTYTGSILIAVNPFTRLPHLYDSHMMAQYK
GAQFGELSPHPFAVADAAYRVMINEGISQSILVSGESGAGKTESTKQLMRYLAYMGGRAS
TDGRSVEQKVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQKGRISGAAIRTYLLER
SRVCQLSDPERNYHCFYMLCAAPPEDLKRYKVGDPKTFHYLNQSNCYQIDGLDERKEYIA
TKNAMDVVGIRSDEQDAIFRVVAAILHLGNIEFTKGKEMDSSTPKDEKSWFHLKTAAELF
MCDVKALEDSLCKRVIVTRDETITKWLDPESAAVSRDALAKVVYSRLFDWLVDRINTSIG
QDPDSKYIIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEINW
SYIEFIDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFATKLYQTFKNHKRFTKPKLS
RSDFTICHYAGDVTYQTELFLDKNKDYVIAEHQALLSASECSFVASLFPTSSDESSKSSK
FSSIGTRFKQQLQQLLETLSSTEPHYIRCVKPNNLLKPAIFENHNVLQQLRCGGVLEAIR
ISCAGYPTRKPFAEFVDRFGILAPEVLDGNSDEIHACKRLLDKAGLEGYQIGKTKVFLRA
GQMAELDARRTEVLGRSASIIQRKVRSFIARKSFILLKRSVLQIQSVCRGQLTRQVYEKM
RREASSIRIQRNLRMHLARKSYNELHNSAVSIQTGLRGMAARNDLRFRRQTKAAILIQSH
CRKLLARLHFIKAKKGAVTIQCAWRGKVARKELRKLKMAARETGALQAAKNKLEKQVEEL
TWRLQLEKRMRADLEEAKTQENAKLQSALQDMKLQFKETKELLIKERETAKKVVESVPVI
QEVPVVDHELTNRLASENEKLKSLVSSLEKKIDDTEKKYEETNKLSEERLKQALDAETKI
IQLKTAMQSLQEKVSDMASENQLLRQKALSTTAPRMTDYPQTPEAKSIPNGHFGNEEPQT
PARNLATEFDSKAKRPPIDRQHENVDALIECVMKDIGFSQGKPVAAFTIYKCLLYWKSFE
AERTSVFDRLIQMIGSAIEDQDNNEHMAYWLSNASTLLFLLQRSIKSDGASSARKPPPPT
SLFGRMTMGFRSSPSSVNIAAAAAALEVVRQVEAKYPALLFKQQLTAYVEKMYGIIRDNL
KKELGSFLTLCIQAPRASKGVLRSGRSFGKDSQSNHWQGIIDCLNTLLSTLKENFVPPII
VQKIFTQIFSYINVQLFNSLLLRRECCTFSNGEYVKAGLAELELWCAQAKEEYAGSAWDE
LKHIRQAVGFLVIHQKYRISYDEIINDLCPILSVQQLYRICTLYWDDNYNTRSVSPDVIS
SMRILMTEDSNNAASNSFLLDDNSSIPFSVDDLSTSLQVKEFSDVKPAVELAENPAFQFL
HE
NT seq
4509 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagtcagtctggggatcgggtcacttgtctgggtcgaggatctagatgacgct
tggatagatggggaagttatcggggtcactggtgaggagatcaaggttgcatctacttca
ggcaagacggttgttgctaagtcatcaaatgtatatccaaaagatgccgaagcaccacca
tgcggagtggatgacatgacaaagctggcttatctacatgaaccaggggttttgaataac
ttacgatctagatatgatattaatgaaatctatacttatacaggcagcatattaatagcc
gtaaatcctttcacaagattgccacatttgtatgatagtcatatgatggcacagtacaaa
ggggcacaatttggggaattgagtccccacccttttgcagttgcggatgcagcatacaga
gttatgatcaatgaaggaataagtcagtcaattttggttagtggagagagtggggctggt
aaaactgaaagcacaaaacaactaatgcgctatcttgcttacatgggaggtagagcttct
actgatggaaggagtgttgaacagaaagttttagagtccaatcctgttttggaagctttt
ggtaatgcaaaaacagtcagaaacaacaattcaagtcgttttggcaagtttgttgagatt
cagtttgatcagaagggccggatctcaggggctgccatcagaacatatctgttggaaaga
tcccgtgtgtgtcaactatcagatcctgagaggaattatcattgcttctacatgctttgt
gcagcaccacccgaggatctaaaaagatataaagtgggagatcctaaaacattccattat
cttaatcaatcaaactgctaccagatagatgggttggatgaaagaaaggaatacattgct
acaaagaatgcaatggatgttgttgggatcagatcggatgagcaggatgctatttttaga
gttgtagctgcaattcttcatttgggtaacatagaatttactaaagggaaggaaatggat
tcatctacccccaaagatgaaaagtcttggttccacctaaaaacagccgcagagcttttc
atgtgtgatgtgaaagctttagaggattctctttgcaaacgtgtaattgtaacgcgtgat
gagaccataaccaaatggctagatccggaatctgctgctgtcagtagagatgcattggca
aaagttgtttactcaagattatttgactggcttgttgacaggattaatacctcaattggt
caagacccagactcaaaatacataattggagtgctggacatatatggattcgagagtttc
aagacaaacagctttgagcagttttgcattaatttgactaatgagaaactccaacaacat
ttcaatcagcatgttttcaaaatggagcaagaagaatacacaaaagaagaaataaattgg
agctacattgagtttattgacaatcaagatatattggatctcattgagaagaaaccaggt
ggcatcatagctcttctagacgaagcttgtatgtttcctaggtcaacacatgaaacattt
gccacaaagctgtaccaaacttttaagaatcacaaacgtttcaccaagccaaaattgtct
cgctctgacttcacgatttgtcattatgctggagatgtaacatatcaaactgagttgttt
cttgacaaaaataaagattatgtcattgcggaacaccaagcactcttgagtgcatcagaa
tgttccttcgttgcaagtttgtttcctacttcatccgatgaatcctccaaatcatcaaag
ttctcttcaattggtacacgatttaagcaacaactgcaacaacttcttgaaactttgagc
tcaactgagcctcattatatacgttgtgtaaagcctaacaatcttcttaagcctgctatt
tttgaaaatcataatgttctgcaacaactgcgatgtgggggagtattggaggcaatcagg
attagttgtgctgggtatcccactagaaaaccatttgccgagtttgtggatcggtttggc
atcctggctcctgaggttttggatggcaatagcgatgaaattcatgcttgcaagagactt
ttggataaggctggacttgaaggctatcagattggtaaaacaaaggtgtttctaagggct
ggtcagatggcagagctcgatgctcgacgaactgaagtgttaggtagatcagccagcatc
atccaaagaaaagttcgttcgtttattgcacggaaaagctttatattgctaaaacgttct
gtcttgcaaattcaatctgtttgccgaggccaacttactcgccaagtttatgaaaagatg
aggagagaagcttctagtatacggattcaaagaaatctgcgaatgcatcttgccaggaaa
tcttacaacgagcttcataactcagctgtttcaatccaaacagggttacgggggatggct
gcacgtaatgatcttcgctttagaaggcagacaaaagcagcaatccttattcagagccat
tgtcgcaagttattggcccgcttgcacttcatcaaggcaaagaagggtgccgttactata
caatgtgcatggaggggaaaagtggcacgaaaagaactgcgaaagcttaagatggcggcg
agggaaactggtgcgctgcaagctgcgaaaaataaactggagaagcaggttgaagaactg
acatggagactgcagcttgagaagcgtatgagggctgacttggaagaagccaaaacacag
gaaaacgcaaaattacaatctgctttgcaggatatgaaacttcaattcaaagagactaaa
gagttgctcattaaggaacgtgaaactgccaaaaaggttgttgaaagtgttccagtcatt
caggaggtccccgttgtggaccatgagctcaccaataggcttgcctctgaaaatgagaaa
cttaagtctttagttagctctttagagaagaaaattgatgatacagagaaaaagtatgaa
gaaactaacaaactcagtgaggagagactgaaacaagctttggatgccgagacgaaaata
attcagttaaaaactgcaatgcaaagtcttcaagaaaaggtttctgacatggcatctgag
aatcaacttcttcgacagaaagcgttgtctacaactgctccccgcatgacagattatccc
caaactcctgaggctaagagcatcccaaatggccactttggaaatgaggagccacaaaca
cctgcgaggaatctggcgactgagtttgacagcaaggctaaaagaccaccaattgatcgt
cagcatgaaaatgttgatgctcttattgaatgtgttatgaaagacattgggttcagccaa
gggaagcccgttgcagcatttactatttacaaatgcctcctctattggaaatcttttgaa
gccgaaaggactagtgtctttgatcgtcttattcagatgattggttcagcaattgaggat
caagataataatgaacacatggcgtattggttgtcaaatgcgtcaactttgttgttctta
cttcaaaggagtattaaatctgatggtgcaagttcagctcgtaaacctccgcctccaact
tcgctgtttgggagaatgacaatgggattccgttcatccccatcttccgtcaacattgct
gcagctgcagctgcacttgaggtagtacgccaggttgaagccaaatacccagccttgctt
ttcaagcagcaattaacagcatatgttgagaaaatgtatggtattatccgtgacaacctg
aaaaaagagttgggatcattcctcactttatgtattcaggcaccacgagcatccaaagga
gtgctacgatctgggaggtccttcggcaaagattcacaatccaatcactggcaaggcatt
atcgactgcctaaatactctcctcagtacattgaaagaaaattttgttcctcctataatt
gttcagaagatatttactcaaattttctcatatatcaacgttcaattattcaacagtctt
cttttgcgccgtgagtgctgtaccttcagcaatggagaatatgtcaaagctgggttagca
gagcttgagttatggtgtgctcaggcaaaagaagagtatgcgggctcagcttgggatgaa
cttaagcatattaggcaagctgttgggttcttggtcatacatcaaaagtacagaatctca
tatgatgaaattatcaatgatttatgccccattctaagcgtccagcagttgtatagaata
tgcacgctttactgggatgacaactataatacccgtagtgtatctccagatgtcatttca
agcatgaggatattaatgacagaggactccaataatgccgccagcaattcatttttactg
gatgacaattccagcatccctttctccgttgatgatctctcaacttccttgcaagtaaaa
gaattctccgatgtgaaacctgcagtagagctcgccgagaatccagccttccaattttta
cacgagtaa
DBGET
integrated database retrieval system
