KEGG   Erigeron canadensis (horseweed): 122580941
Entry
122580941         CDS       T07610                                 
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad03010  Ribosome
ecad04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    122580941
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    122580941
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:ecad03011]
    122580941
   04121 Ubiquitin system [BR:ecad04121]
    122580941
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ecad04147]
    122580941
Ribosome [BR:ecad03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    122580941
  Archaea
    122580941
Ubiquitin system [BR:ecad04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   122580941
Exosome [BR:ecad04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   122580941
  Exosomal proteins of colorectal cancer cells
   122580941
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 Plexin_RBD Dsc3_N DUF2604 UBL_UBAC1 TBK1_ULD Thioredox_PDIA6_C OTU1_UBXL Fer2_3 Ubiquitin_5
Other DBs
NCBI-GeneID: 122580941
NCBI-ProteinID: XP_043609026
LinkDB
Position
1:complement(1387684..1389449)
AA seq 153 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHRKVKLSVLQFYKVDDSGKVQRLRKE
CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA
NT seq 462 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaaaaccctaacggggaagacgataaccctagaggttgagtcttcc
gataccatcgataacgtcaaggccaagatccaagacaaggaaggcatcccacccgaccag
cagcgcctcatcttcgccggcaagcagctcgaagacggccgcaccctcgccgactacaac
atccagaaggagtccactctccatctcgtcctccgtcttcgtggcggcgcaaagaagagg
aagaagaagacgtacaccaagccaaagaagatcaagcacaagcacaggaaggtcaagctc
agcgtcttgcagttctacaaggtcgatgattccggcaaggttcagaggctgaggaaggag
tgccccaacgccgagtgcggtgctggaacgttcatggccaaccactttgatcgtcactac
tgcggcaagtgcggcctcacttacgtctatcagaaggcttga

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