Erigeron canadensis (horseweed): 122580991
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Entry
122580991 CDS
T07610
Name
(RefSeq) eukaryotic translation initiation factor 4G-like
KO
K03260
translation initiation factor 4G
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecad03019
]
122580991
03012 Translation factors [BR:
ecad03012
]
122580991
Messenger RNA biogenesis [BR:
ecad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
122580991
mRNA cycle factors
Stress granule specific factors
122580991
Translation factors [BR:
ecad03012
]
Eukaryotic type
Initiation factors
eIF-4
122580991
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
FANCI_S2
Motif
Other DBs
NCBI-GeneID:
122580991
NCBI-ProteinID:
XP_043609070
LinkDB
All DBs
Position
9:25888389..25897066
Genome browser
AA seq
1593 aa
AA seq
DB search
MSVNQSRGDKNEYPSQYKKSNRSANSSSQRNFSGNKGGAAAGSNTSSSNKSFKKVNSHAQ
GVQTRVNSPNTNAESVNTSATGGAKVLNGVHSQQPARGPSGAPATGANIKPSHVSNEKIT
PGLPRAPQGNAGVPAAEATGLSTPTKDQVDASKGFSLQFGSISPSLMNGMQVPARTSSAP
PNFDEHKQAQALHEPLKSVKAPPPAVPKQELPRKDAGSVDQPKANEVHLIPKPKKDVQTM
PSLATLPQKLSGPPIPGVPMQAQIPFHHPQLHVQYGGLNPQMQSQGMTNIPLPIPLPMGS
PPQVQQPVFVAGIQHHPMQQPQGIIHQGPSLNFPAQIGPPQMPPQLGSMGIGLGQHYPQQ
QTGKPTAHRKTVKITHPDTHEELRLDGGSKGPGLRSTHSHGMSQSQAISSFPSSHPMNYY
PNPVFFQPPSNPLASTQTTHVSQPPRLYSQVTVKPAANAPEKVIDSASIIDKDKLHKTPI
DHKTSTGLSTIASKPSNVTQSENSSVSASSNVEDEVAKGPIVSRSGSFKEKKAQSTPLDQ
EVGHLEVLMTSNPVMATEEEASEASKKVAAVDFTVSKGKEGLKCTETSDVQEPIAEAVGS
DDRKEDVRNNEPEQHRIVTSTSDQSMSEHKLLTSADLNVLNAETSSLNLGPSPSDNIPVS
ESDSRAVSVCVPEGVETVDTASLESSTSLVSMVDISKGKGNIGKPKKKKKDILKLADAQG
TNSDLYNAYKGPEEKKGTPSPETPDTSSGITAKQVEKDVPCGSNKFEPDDWEDAADISTP
KLDTPGNSVENDGLAKRYTRDFLLKFCEQCKELPNGFELIPEISEAVVSVNASRESYPSP
GRVVDRSAARLDRRSSNVSQDDRWNRGPIGVPGWDIRIDNSYPGNVPGIRPVHGVSRHPR
ALTPIQYTNGILSGPMQSPGPYMQRNNSDSDKWQRASRGLPSPHTPMQDMHKAEKKYEVG
KVTDAEQAKQRQLKSILNKLTPQNFEKLFDQVKQVNIDNAGTLSGVINQIFDKALMEPTF
CEMYANFCSRLAVDLPDFSEDNQKITFKRLLLNKCQEEFERGEREEQEANRTEEEGEVMQ
TEEQREEKRIKARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGQNQNPDEENIESLC
KLMTTIGAMIDHPKAKEHIDAYFGTMLRLSDNMILSSRLRFMLKDVIDMRKNKWQQRMKV
EGPKKIEDVHRDIIQERHEQTTRLTRGPSFNSSLRRGPSQPTDFGQRGSNSNLLPSPNSQ
MGGFRGPPQQLRGYGNQDSRFDERQASENRMLLRSFGDNDSITLGPQGGLARGMSVRGQP
SIQSIISEPAASRRVAPGPNGFGPREDLGSRYISERLTPQPAYGPSYVNRDISNPEQGFD
HGASSSLVANPSQNVSSDKVWPEERLRDMSMQAIKEFYSARDEKEVALCIKDLNAPSYYP
SMISIWVSDSFERKDVDRDSLTKLLVNLAKAPDGMLNQGSYIQGFKAVLATLEDSVNDAP
RAAEYFGRILGKLLIEDVISYKEAWGLIYEGGEEQGRLVEIGLAAEVLGVILEIIKSEKG
DPFLNEVRAVSNPKLEEFRPPNIKKPLRLDKFI
NT seq
4782 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcaatcaatcaagaggtgataaaaacgagtatccatcgcaatacaaaaaatca
aatcgatctgccaactcatcgtcgcaaaggaatttttccggcaataaaggcggcgccgcc
gccggttccaacacctcctcatctaataaaagttttaagaaggtaaatagtcatgcacaa
ggagtacaaactcgggtgaatagtccgaatacgaatgcggaatcggtgaatacgtctgct
actggaggtgctaaagtgcttaatggcgtgcattcgcaacagcctgcacgtggtccgtct
ggtgctcctgctactggtgctaatataaagccgtcccatgtatcaaatgagaagatcacc
ccgggcctaccgagggccccgcagggtaatgctggcgttccggctgctgaggctactggt
ctttcgactccaacaaaggatcaagtagatgcttctaagggtttttctcttcaatttggg
tcaattagtcccagtttgatgaatggaatgcaggtacctgcacgaaccagttctgcacca
ccaaattttgatgagcacaaacaggcccaggctcttcatgaacccttaaaatctgttaaa
gctccacctccagctgtcccgaaacaagagttacctaggaaagatgctgggtcggttgat
caacctaaggccaatgaggtccatcttatccctaaaccaaaaaaagacgttcaaaccatg
ccttcacttgcaactctacctcaaaagctctctggtcctccaattcctggggttcccatg
caagcacagataccattccatcatcctcaacttcatgttcagtatggtggtcttaatcca
caaatgcaatcccaaggaatgactaatatacccctcccaatacctttaccgatgggaagt
cctcctcaagtgcagcagccggtatttgttgctggcatccagcatcatccaatgcagcag
cctcaggggatcattcatcaaggtccgagtttgaactttccagctcaaataggaccgcct
cagatgccacctcagctaggaagtatgggaattggtttaggacaacattatcctcagcag
cagactggaaaacccactgcgcataggaaaactgtgaagattactcaccctgacactcat
gaggagttgagacttgatggtgggtccaaagggccaggccttaggtcaactcattctcat
gggatgtctcagtcacaggcaatatcatcttttccatctagtcatccaatgaactactat
ccaaatccagttttttttcaaccaccttctaatcctttggccagtacgcaaacaactcat
gtttctcagccaccgaggctttatagtcaggtgacagtaaaacctgctgctaatgcgcct
gaaaaggttattgattctgcatctattattgacaaagataagctccacaaaactcccata
gatcataaaaccagcactggattgtctactatagcaagtaaaccatccaatgtaacacaa
tctgaaaattcatccgtttctgcttcttctaatgttgaggatgaagttgcaaaagggcca
attgtgagcaggtctggttcttttaaagagaaaaaggctcaatcaactcctctggatcag
gaggttggacatttggaagttttaatgacctcaaatcctgtaatggcaaccgaagaggag
gcttcagaagccagcaagaaagtagctgctgtagattttactgtttcaaaaggtaaagaa
ggcctcaagtgtactgaaacaagtgacgttcaagagccaattgctgaagctgtggggtca
gatgatcggaaagaagatgtgaggaacaacgagcctgagcaacacaggattgtgacatct
acaagtgatcaaagtatgagtgaacataaattactgacatcagcagatcttaatgttctt
aatgctgaaacatcttcacttaatttgggcccctctccaagtgataatatcccagtttca
gaatctgattcgagggcagtatcagtttgtgttcctgaaggagtggagacagttgacact
gccagcttggagtcttctacatcattggtttccatggtggatatcagcaagggaaagggt
aatataggtaaacccaagaaaaagaaaaaagatatattgaaacttgcagatgctcagggg
acaaattctgatctttataatgcttataaaggcccagaagaaaagaaaggaaccccatct
cctgaaacaccagatacttcctcggggataacagcaaagcaggtagagaaagatgttcca
tgcggcagtaacaaatttgagccagatgattgggaagatgccgctgatatttctactccc
aaacttgacaccccggggaattcagtggaaaatgatggattggccaaaaggtataccaga
gactttttactaaaattctgcgaacagtgtaaagaacttccaaacgggtttgaactgata
ccagagatatccgaagcagtggtatctgtaaatgcttcccgggaatcatatcctagcccg
ggtagagttgtcgacagatcagcagcccgattagatcgccggtcaagtaatgtcagtcag
gatgacagatggaataggggtcccattggtgttcctggatgggacatacggattgataat
agctaccctggaaatgtacctggtattagaccggtccatggtgtgtcaaggcacccacgt
gcattgacaccgattcagtatacaaatggcatcttatctggcccaatgcagtctcctggc
ccatatatgcaacgcaataattctgattctgacaagtggcaacgtgcgagtaggggttta
ccttctccacatactccaatgcaagatatgcataaggcagaaaaaaaatatgaagtgggt
aaagtaacagatgcagaacaagccaagcaaagacagttaaagagtatcctaaataagcta
actccgcaaaactttgaaaaactgtttgaccaagtcaaacaagtgaatatcgacaatgca
ggaactctttcaggtgtaattaatcaaatctttgataaagctttgatggaacccacattc
tgtgaaatgtatgccaatttttgctctcggctggctgtagatctgccagatttcagtgaa
gataatcaaaagatcacgtttaagagactattattgaataaatgtcaagaagagtttgag
agaggagaacgggaagaacaagaagccaatagaactgaggaggaaggtgaagttatgcaa
actgaagagcaacgggaagagaaaagaatcaaggctcggagacgcatgttgggtaacatt
agattaatcggcgagttgtataaaaagaaaatgttgacagaaagaattatgcatgaatgc
ataaagaaactgttgggccagaatcaaaacccagacgaggaaaacatagagtcgttgtgt
aaattgatgaccacaattggggcaatgattgatcatcctaaagctaaggaacacatcgat
gcgtattttggcacgatgttaagattatcagataacatgatactttcttcaaggctgcgt
tttatgttgaaagacgttattgatatgcggaagaataaatggcagcaaagaatgaaagtg
gaaggacccaaaaagattgaagatgtacaccgcgacattattcaagaacggcatgaacaa
acaaccagactcactcgtggaccgagtttcaactcttcacttaggagggggccaagtcag
cccacggactttggacaaagagggtcaaactcgaatcttttaccttcgccgaattctcaa
atgggtggatttcgtggaccgccccaacagcttcgtggctacggaaatcaagattctcga
tttgatgagagacaggcgtctgaaaataggatgctgttaagatcctttggtgataatgac
tctattacccttggcccacaaggtgggcttgcgagggggatgtctgttagaggtcaacct
tccattcaaagtataatatctgagcctgcagcctctaggagagttgcacctggtccaaat
ggttttggtccacgagaagaccttggttcgagatatatctcggagcggttaactcctcaa
cccgcttatggcccgtcatatgttaatcgagacatatcaaaccccgagcaagggtttgac
catggtgcatcctcttcactagtggcaaatccttcgcaaaacgtctcttcagataaagtc
tggcctgaagagcgtttacgcgatatgtcgatgcaggcaattaaagaattttatagtgca
agagacgagaaagaagttgctttatgcatcaaggatttgaatgcacccagttattatccg
tcaatgatatccatttgggttagtgattcctttgagaggaaagacgtggatagagattca
cttactaagctccttgtcaatcttgcaaaagctccagatggaatgctaaatcaaggctca
tatattcaagggtttaaagctgttcttgctactttggaggattctgtcaacgatgctcca
agagcagcagaatattttggccgaatattggggaaactgcttatagaagatgtgatttcg
tataaagaagcgtgggggttgatatatgaaggcggggaggagcaaggaaggctagtcgaa
ataggacttgctgcagaagtactcggggtcattttggagataattaaatctgaaaaaggc
gacccgtttttgaatgaagttcgtgcagtatctaatcctaagttggaggaatttcggcct
ccaaatattaaaaaaccgttgagattagacaagttcatttag
DBGET
integrated database retrieval system
