Erigeron canadensis (horseweed): 122581050
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Entry
122581050 CDS
T07610
Name
(RefSeq) protein argonaute MEL1-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecad03019
]
122581050
03036 Chromosome and associated proteins [BR:
ecad03036
]
122581050
Messenger RNA biogenesis [BR:
ecad03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
122581050
Chromosome and associated proteins [BR:
ecad03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
122581050
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
122581050
microRNA pathway
RISC loading complex
122581050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
122581050
NCBI-ProteinID:
XP_043609123
LinkDB
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Position
9:complement(31319694..31327650)
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AA seq
924 aa
AA seq
DB search
MSGRGRGGTAPGRGRGRGRGRAGELPVSSFQNLSIGSSAPSPAGPPVMQQQRPVQQAVAA
APSPSPSVPSAPMSSKKLAAPPRAGFGTVGRKCVIKANHFLVDLGEKDPYQYDVTITPEV
TSKTKCRDIMNILSKFYKASHMGNMLLAYDGKKSAFAAGALPFESKEFVVKLEEQQREKE
FKVTIKFAARKDLHHLRQYLAGRQSDIPQETIQALDVVLRESASKNREIIGRSLFTPDGK
GVLGDGVEFWKGFYQSMRPTQMGMSLNIDMAARAFYEPRLVSDFVGEFLGKDISRPLSDQ
ERLKVKRALRGVRVEVRRKDYMRRYKVNGLTAQPLNQLTFVDETGATTTVVQYFRTKYNI
QIRFPFLPAIQAGTEAKPTYLPMETCWLAGGQRYALKLNEKQVTNFLRATCQRPKDREES
IMRTMQSNKYNDDDLVNKDFGMRVKEQLTTIDARVLPPPPLKYHGSSEINPLVGQWNMID
LKMINGGTVNYWAIANFSRQREDAVGRFCHELVQMCMNKGMVFNPQPLIRMFSAPPHNIE
KALADILSQCNTQLTSVAPGSQLQMLFVILPEAKGTYPRIKRVCETELGIVSQCCKPQHV
MKLSKQYLENVALKINVKVGGRNLVLSAALNNKLPYVTDRPTIIFGADVTHPSPGEDSSP
SIAAVVASMDWPQVTKYKALVSAQSHRQEIIQDLYTTSTDSKRGIVHGGLIRELLISFKK
STGHKPHRIIFYRDGVSEGQFNEVLLSEMDKIRRACISLEENYMPPVTFVVVQKRHHTRF
FPSRHGDRGTTDRSGNILPGTVVDTKICHPTEFDFYLCSHAGIQGTSRPTHYHVLYDENK
FTADGLQMLTNSLCYTYARCTRSVSIVPPAYYAHLAAFRARNYIEGGDLSDSDSRGARTT
REKAAAVKPLPVIHDNVKSVMFYC
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcagaggacgtggaggaacggcacctggtcgtgggcgtggacgtggacgtgga
cgcgccggtgaacttccggtttcgtcgttccagaacctctctataggttcgtcggcgccg
tctccggccggtccacctgtaatgcagcaacagcgtccggttcaacaagcggtggcggct
gctccgtcgccgtctccgtccgtaccgtcggcacctatgtcgtcgaagaagctagccgct
ccgccgagggctggttttggtactgttggtagaaagtgtgtgattaaggcgaatcacttc
ctcgtcgatctaggcgagaaagatccgtaccaatatgatgtgacaattacccctgaggta
acttcaaagacaaaatgtagagatatcatgaatattcttagcaagttttacaaggcttca
cacatgggaaacatgttgcttgcttatgatgggaagaaaagtgcatttgccgctggagct
ctgccgttcgagtcaaaagagttcgttgtaaaactcgaagagcagcagcgtgaaaaagag
ttcaaggtgactattaagtttgctgctcgaaaggatcttcatcacttgagacagtacttg
gctggaagacaaagtgatataccacaagagactattcaagctcttgatgtggttctgagg
gagtctgcttctaaaaaccgtgaaataattggccggtcactgttcactcctgatggcaaa
ggtgttctaggtgatggtgttgagttttggaaagggttttaccagagtatgcgaccaacg
caaatgggcatgtcactcaacattgatatggctgcaagggctttttatgaaccgaggttg
gtctcagattttgttggagaatttcttggcaaagatatatcaaggccactttcagaccaa
gaacgtcttaaggtcaagagagctcttagaggtgttagggttgaagttcgccggaaggat
tacatgaggcgctataaggttaacggattgactgctcaaccgcttaaccagctaaccttt
gttgatgaaacgggagcaactacaactgttgttcaatacttccgtaccaagtacaatatc
cagattcgttttccctttcttcctgctattcaagctgggacagaagcgaagcctacgtat
ctgcctatggagacttgctggcttgctgggggacaaaggtatgctttgaagctaaatgag
aagcaagtgactaacttcttaagggctacttgccaacgcccaaaagatagagaagaaagc
attatgaggacaatgcagagtaacaagtacaatgatgatgatctagtgaacaaagatttt
ggcatgcgggtgaaggaacagcttacaacaattgatgcacgagttcttccaccacctcct
ctcaagtatcatggttcttcagagattaatccattggttggtcaatggaatatgattgat
ctgaaaatgataaatggaggcactgtcaattattgggctatcgccaacttttcaaggcaa
agagaagatgctgttggacgcttttgccatgaacttgtccagatgtgtatgaacaaagga
atggtatttaatccccagccactgatccgaatgttttctgctccgcctcacaacattgag
aaggccctggctgatattctctctcagtgtaacacacaactaacgagtgttgcacctgga
agccagcttcaaatgctgtttgtgattcttccagaggcaaaaggaacttatccaagaatc
aagcgagtctgcgagacagagttggggattgtttctcagtgctgtaaaccgcaacatgtg
atgaagctcagcaagcaataccttgagaatgtggctttgaagattaatgttaaggtgggg
ggcaggaacctggttttgtctgcagctctcaataataagcttccatatgtaactgatcgg
ccaactataatcttcggggccgatgtcactcatccttcaccaggagaagattcaagccct
tcaattgctgctgtggtagcgtctatggattggccccaagtcaccaagtataaagcccta
gtctctgcacagtcacacagacaggaaattattcaggatttgtacacaacttccactgat
tcaaaaaggggtatagttcatggagggttaataagggagctcttgatatcttttaagaaa
tctactggacataaacctcatcgaattatattctacagggatggtgtcagtgaaggacag
tttaatgaggttcttttgagcgagatggacaaaatccgcagggcttgtatctctttggag
gagaactatatgcctcctgtaacatttgtggttgttcaaaagaggcatcatactcgtttc
tttccctctaggcatggtgataggggtaccactgataggagtggaaatattcttcctggt
actgtggttgataccaaaatctgtcaccctactgaattcgacttctacttatgtagccat
gctggtattcagggaacgagtcgtccaacgcactaccatgtgctatatgatgagaacaaa
tttaccgctgatgggttacaaatgctcacaaacagtttgtgttacacatatgctaggtgt
acccgatctgtttctatagtccctcctgcatactatgctcacttggccgcgttccgtgct
cgtaactacattgaaggaggagatctatctgatagtgattcacgtggtgcacgaacaaca
agggagaaagctgctgcagtcaaaccactaccagtaattcatgataatgtgaaaagtgtg
atgttctactgttag
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