Erigeron canadensis (horseweed): 122581085
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Entry
122581085 CDS
T07610
Name
(RefSeq) soluble starch synthase 3, chloroplastic/amyloplastic
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00500
Starch and sucrose metabolism
ecad01100
Metabolic pathways
ecad01110
Biosynthesis of secondary metabolites
Module
ecad_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
122581085
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ecad01003
]
122581085
Enzymes [BR:
ecad01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
122581085
Glycosyltransferases [BR:
ecad01003
]
Polysaccharide
Storage polysaccharide
122581085
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Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_5
CBM53
Glyco_transf_4
Glycos_transf_1
Glyco_trans_1_4
Glyco_trans_4_4
Motif
Other DBs
NCBI-GeneID:
122581085
NCBI-ProteinID:
XP_043609167
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All DBs
Position
9:complement(11753246..11762510)
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AA seq
1136 aa
AA seq
DB search
MDVGLHIHNNTPSLCSAKTVVKIGPFIGSHTSTRTNLFSQFTQSCSWYKYSAIAGFSHQI
IASSDFSRKRRYKLSTPRANDSAPKGFKPKQSSSKRDQKAVEGKEVLNPSISTEVVSPSK
KESKIQVKIDEVPQYSQSVEKVKIDMTDEARVSGSQKDSQIETLSSENEDDEESLRILKL
ETEARLLKQQIEEELRKKQMKEELRKKQMEEELRKKELEANLRIQELKKLANETLVSGGK
VFHYPRIVTPHQDIEIFLNRTVSSLCDESDILIMGAFNDWRYKSFSVKLTKTNFGLDWWS
CQVHVPKEAYKMDFVFFNGKDVYENNDMKDFCVLVEGGMDVFEFEELLLEEKRRELERLA
KVQLEREKQLEEQKRIEALKASSEADRAQAQGEAERRRGILEELLVKARKFDENVWYIEP
SEFKWEDKVKLYYNKSVGPLANVKDLWILGGYNNWRDGLSIVAKLEKFQRKDGGDWWYAD
VVVPNRSLVLDWVFADGPPQHATMYDNNDRKDFHAIVPITIPQDLFWAEEEHEIYKTLQA
ERRIREEEIRAKAEKTARLKAEAKERTMKTFLLSQKNIVYTDPLDVQAGGVVTVFYNPTN
TVLNGKPEVWFRCSFNRWTHRIGLLPPQKMLPADNATHVKTSVKVPLDAYVMDFVFSEKE
TDDGVFDNKNGMDYHIPVFGAITKEPPMHIVHISVEMAPIAKVGGLGDVVTSLSRAVQDL
NHNVDIILPKYDILNLSNVKDFGFHKSYSWGGTEIKVWFGKVEGLSVYFLEPQNGLFWKG
CIYGCNNDGERFGFFCHAALEFLLQSGSHPDVIHCHDWSSAPVAWLFKDEYMHYGLSKAR
IVFTIHNLEFGAKLIGKAMAYADKATTVSPTYSKEVAGNPVIAPHLYKFHGILNGIDPDI
WDPYNDKLLPVSYTSENVVEGKKAAKEALQQSLGLKRADLPLVGIITRLTHQKGIHLIKH
AIWRALDRGSQVVLLGSAPDPRIQNDFVNLASQLHSTHNDQARLCLTYDEPLSHLIYAGA
DFILVPSIFEPCGLTQLTAMRYGSIPIVRKTGGLFDTVFDVEHDKERAQSQGLVPNGFNF
EGADAAGVDYAVNRAISAWYESRDWFNSLCKQVMEQDWSWNRPALDYLELYHAARK
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atggatgtaggtttacatattcataataatacaccatctttgtgtagtgcaaaaacagtt
gtaaagattggaccttttattgggtctcatacttcaacaagaacaaacttgttttcacag
tttacgcaatcttgttcatggtacaaatattctgcgattgctgggttctcgcatcaaatt
attgcaagttcagacttttctagaaagagacgatataagttgtccacaccaagagcaaat
gactctgcaccaaagggatttaagccgaaacaaagcagttcaaaaagagatcaaaaggca
gttgaaggaaaagaagttctaaatccttctatttctacagaggttgtgagtccctcaaaa
aaggaaagtaaaatccaagtaaaaattgatgaagttcctcagtacagtcaaagtgtagaa
aaggtaaaaattgatatgacagatgaagcaagagtatcaggttcacaaaaagatagtcaa
attgaaactttaagtagtgaaaatgaagatgacgaggagtctttacgaatattaaagtta
gaaacggaagcacgtttacttaaacagcagatagaagaggagttgcgtaagaaacagatg
aaagaggagctgcgtaagaagcagatggaagaagagctgcgtaagaaggaactggaagct
aatttaagaattcaagaactcaaaaagcttgctaacgagactcttgttagtggtggaaaa
gtatttcattatcctagaatcgtaacacctcatcaagatatagaaatatttcttaacaga
actgtttcaagtttatgtgatgagtcggatatcttgataatgggagcttttaatgattgg
cggtataaatctttctctgtaaagttaaccaagacaaattttggtttggattggtggtct
tgccaagtccatgttccaaaagaagcatacaagatggattttgtgttttttaacgggaag
gatgtttatgaaaacaatgacatgaaggatttttgtgtacttgtagagggtggaatggat
gtgtttgaatttgaagagctattacttgaggaaaaacgaagagaacttgaaagacttgca
aaagtacagcttgagagagagaaacagctggaagaacaaaaacggattgaagcattaaag
gcatccagtgaagcagatagagcgcaggctcaaggtgaagctgagcgaagaaggggaata
cttgaagaacttttggtaaaggcgaggaagtttgatgaaaatgtttggtacatagagccc
agtgagtttaaatgggaagataaggttaagctatattataataagagtgtgggtccactt
gcaaatgttaaagatttgtggattcttggaggttataataattggagggatggtctgtct
attgttgcaaaacttgagaagtttcagaggaaagatggtggcgattggtggtatgctgat
gttgttgtccccaatcgttcactagtcttggattgggtgtttgctgatggtccgcctcag
catgccaccatgtatgataacaatgatcgtaaagatttccatgcgattgtccctataacc
attcctcaagatctcttttgggctgaggaagaacatgagatttacaagacacttcaagct
gaaagaaggattagagaagaagaaatacgtgctaaggctgaaaaaacagcacgtttgaaa
gcagaagcgaaagaaagaactatgaaaacatttttactgtcacaaaagaacatagtttac
accgaccctcttgatgtccaagcaggaggcgttgtgacggttttctacaatcctacgaac
acggtgctcaatgggaagcctgaagtatggtttagatgttcttttaaccgttggacacac
cgcataggccttttgccacctcaaaaaatgttgcctgcagacaatgcaacacatgtcaaa
acatcagttaaggtcccactagatgcgtatgtgatggactttgtattttctgagaaggaa
actgatgatggtgtttttgacaataaaaatgggatggactaccatatacccgtgtttgga
gcaattacaaaggaacccccaatgcatatcgtacatatttctgttgaaatggctcccatt
gcaaaggtgggaggccttggtgatgtggtgactagtctttctcgtgctgttcaggatttg
aaccacaatgtcgatatcattcttccaaagtatgatatcttgaatctaagcaatgtgaag
gactttggtttccataagagttactcatggggtgggactgaaataaaagtttggtttggg
aaagttgaaggactttctgtctactttctagagccccaaaacggactcttttggaaagga
tgcatttatggttgcaacaacgatggtgaaagatttggttttttctgtcatgctgctctt
gaattccttcttcaaagtggatctcatcctgatgtgattcattgtcatgactggtctagt
gcacccgttgcttggctgtttaaggatgagtatatgcattatggactgagtaaagcacga
attgtcttcaccattcataatcttgaatttggggctaaattgattgggaaggcaatggcc
tatgccgacaaggctactacagtatctccgacttactcaaaagaggttgctggaaatcct
gtgattgcccctcacttgtacaagtttcatggaatacttaatggcattgacccagacata
tgggacccatataatgataagttacttcctgtgagttacacttcagaaaatgtggtggaa
ggcaaaaaggctgccaaggaagccttgcaacagagtcttggtttaaaacgagctgatcta
ccattggttggaatcatcactcgtttgactcatcaaaaaggaattcaccttattaaacat
gccatttggcgggccctggaccgtggcagtcaggttgtgttgctaggctcggctcctgat
cctcgaatccaaaatgattttgttaatttggctagtcaactacattctacacataatgac
caggcacgactatgtttgacctatgatgaacctttatctcacttgatatatgctggtgca
gatttcatcttagtcccttcaatattcgagccttgtgggctaactcaactcacagcaatg
agatacggttcgatacctattgtgcgcaaaactggaggactcttcgatactgtttttgat
gttgaacacgataaagaaagagcacaatcacaaggacttgtaccaaatggttttaatttt
gaaggggccgatgctgctggtgttgattatgccgtcaacagggcaatttctgcatggtat
gaaagtcgggattggttcaattcattatgcaaacaggtgatggagcaagattggtcatgg
aatcgaccggctcttgattaccttgagctctaccatgcggctcgaaaatga
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