Erigeron canadensis (horseweed): 122581098
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Entry
122581098 CDS
T07610
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit B-like
KO
K03253
translation initiation factor 3 subunit B
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecad03019
]
122581098
03012 Translation factors [BR:
ecad03012
]
122581098
Messenger RNA biogenesis [BR:
ecad03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
122581098
Translation factors [BR:
ecad03012
]
Eukaryotic type
Initiation factors
eIF-3
122581098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF2A
RRM_1
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_ELP1_1st
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
PIF1
Motif
Other DBs
NCBI-GeneID:
122581098
NCBI-ProteinID:
XP_043609181
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All DBs
Position
9:25609811..25615254
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AA seq
708 aa
AA seq
DB search
MADVDVRSEAARLNIDLSSVDWDSIQLPPGEDFGIKSDDDDLKEEDSLEFDAGFGSIIIV
DNLPVVPREKFEKLEGVVRKIYSQIGVIKENGLWMPVDEDTGKTRGYCFIEYNTPQEAEL
AKEKTNGYKLDRAHIFAVNMFDEIDKFMNVPDEWAPPEIKPYVPGENLQQWLTDEKGRDQ
FVIRAGSDTEVLWNDARQVKADPVYKRPFWTESFVQWSPLGTYLATVHRQGAAVWGGAST
FNRLMRYAHPQVKLIDFSPGEKYLVTYSSHEPSNPRDTHRVVLNIFDVRTGKVMRDFRGS
ADEFAIGGTGGFTGVSWPVFRWGGGKGDQYFARMGKNVISVYETETFSLIDKKSIKVENV
MDFSWSPTDPIFAIFVPELGGGNQPARVSLFQIPSKEELRQKNLFSVSDCKMYWQSSGEY
LAVKVDRYTKTKKSTYTGFELFRIKERDIPIEVFELDNKNDKVIAFAWEPKGHRFAVIHG
DNPRPDVSFYSVKGGKVAKLTTLKQKQANALYWSPGGRFIILAGLKGFNGQLEFYNVDEL
ETMATAEHFMATDIEWDPTGRYVATSVTSVHEMENGFQIWSFNGKQLYRILKDHFFQFLW
RPRPPSFLSPEKEEEIAKNLKKYSKKYDVQDQDISVLLSEQDREKRKQLKDEWERWVNEW
KKYHEEEKMEREMLRDGEASDVEEEYEAKEVEVEELLDVSEEVIPDAA
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgtggacgttaggtccgaagctgctcgtttaaacatcgatctgtcttcagtt
gattgggattccattcaactgcctcccggtgaagattttggcatcaaaagtgatgatgat
gatcttaaggaggaggattcactggaattcgatgctgggttcgggagtattattattgtg
gataacttgccggtcgtgcctagagagaaatttgagaagcttgaaggcgtggtacgtaaa
atttacagtcagattggtgtaataaaggaaaatggtctttggatgccagttgatgaagac
actggcaaaacccggggctattgtttcatcgagtacaacaccccccaggaagctgagctt
gctaaggagaagaccaatggatacaagctagacagagctcatatttttgctgtcaatatg
tttgatgaaatcgataaattcatgaacgtaccagatgagtgggcgcctccagaaattaag
ccttatgtaccaggggagaatctgcaacagtggctcactgacgagaaaggcagagaccag
tttgtcattcgtgctggatctgacacagaggtcctttggaatgatgcgagacaagtgaag
gctgatcctgtttacaagcgccctttttggacagaaagttttgtgcagtggtctccattg
gggacctacttggccacagttcatcgacagggtgctgctgtatggggaggtgcttctaca
tttaatcgtctcatgcgctatgcacatccacaggttaaattaattgatttctctcccggt
gaaaaatatctggttacctatagcagccatgagccaagcaacccgcgtgatactcatagg
gtagtgctcaacatatttgatgtaagaactgggaaagtaatgagagattttaggggaagt
gctgatgagtttgcgatcggagggactggtggttttactggggtatcgtggcctgttttc
agatggggtggcggtaaaggggaccagtactttgctcgaatgggcaaaaatgttatttca
gtttatgagacagagactttcagtcttattgacaagaagtccattaaagttgagaatgtc
atggacttcagctggtctccaactgatcctatttttgcaatttttgttcctgaacttggt
ggcggaaatcaacctgcaagagtgagtcttttccaaatccctagcaaagaagagctgaga
cagaaaaatctgttttctgtcagtgactgcaaaatgtattggcaaagcagtggagagtac
cttgcagttaaagttgacagatacacaaaaaccaaaaaaagcacatataccggctttgag
ctattcagaatcaaagagcgtgacattcctatcgaggtttttgaacttgataacaagaat
gacaaggtaatcgcatttgcttgggagccaaagggccataggttcgcagttattcatggt
gataatccgcgtccagatgttagtttttattcggtgaaggggggaaaggtggcgaagctc
acaactctcaagcaaaagcaagcaaacgctctgtattggtcacctggtgggcgttttatt
attctggctggattgaagggatttaatggacagttggaattctataatgtggacgagctt
gaaactatggcgactgctgagcatttcatggcaacagacatagaatgggatcctaccggg
aggtatgttgcaacttcagtaacctcagtgcatgaaatggaaaatggattccagatatgg
tcattcaatggcaagcaactctaccgaattctaaaggatcatttcttccagttcttgtgg
aggccaagaccaccatcttttttgagccccgagaaagaggaagaaattgcaaagaacctg
aagaagtacagtaaaaagtatgatgtccaggatcaagatatctcagtattgttgagtgag
caggatcgggaaaagaggaagcagttgaaggacgaatgggagaggtgggtcaatgaatgg
aagaaatatcatgaggaagagaaaatggagagagaaatgctgagagatggcgaagccagt
gatgtagaagaggaatacgaggctaaagaagtcgaagttgaagaattgttggatgtatct
gaagaagtcattccggatgctgcctaa
DBGET
integrated database retrieval system
