Erigeron canadensis (horseweed): 122581144
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Entry
122581144 CDS
T07610
Name
(RefSeq) EIN3-binding F-box protein 1-like
KO
K14515
EIN3-binding F-box protein
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04016
MAPK signaling pathway - plant
ecad04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
122581144
04075 Plant hormone signal transduction
122581144
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122581144
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
122581144
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GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_At5g56370
F-box-like
F-box
F-box_5
LRR_RPS2
Motif
Other DBs
NCBI-GeneID:
122581144
NCBI-ProteinID:
XP_043609243
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Position
9:complement(37440702..37443996)
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AA seq
625 aa
AA seq
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MQKLYGEEVLYPGMLKYQNPGELNLFLSFGPHVDVYFPPRKRSRVSAPFVFCEGLFKKSQ
TTIDVLPDECLFEILRRVSDGHDKSACASVSKRWLMLASTIRRDEQKKAEDFDKSGGCLT
RCLKGKKATDIRLAAISAGSGSRGGLGELSILGNNASKVTDFGLKAVARGCPSLTSLTIW
NLSSIKDEGISEIANECRLLEKLELSHCPALTNKSLVAIADNCPNLSSLSIDSCSNIGNE
GLQAIGKCCLNLKSISVKNCPLVGDQGVSSVVASASSSLMKMRLHGLNISDASLAVIGHY
GLALTDLGLYDLRNVTEKGFWVMGSGQGLQKLRSIVIVACSGVTDLGLEALGKGCPNLKH
FCVRKSDFLSDKGIVSFAKATQSVEVVMLEECNTVTQLGIFGLLVNCGNIKALSLAKCLG
IKDLPMIIPSGLSPCNSMKSLSIVNCPGFGNISLALLGRICPQLQDVVLTGLQGITDNGF
SSLIKNCESGLTKIDLSGCVNLTDKTVSEISMVHGGTLEVLKLDGCRSITDASVVTVAQN
CLFLRELDVSKSAITDFSIAALACAELLNLQVLSVSGCQVSNKSLPFLKKLGETLVGLNL
MQCCGVSGSAVGKLGAQIYKCDILV
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaactatatggtgaagaagttctttatcctggtatgctgaaataccaaaatccc
ggagagttgaatctcttcttgtcttttggtcctcatgtagatgtatactttccacctcgc
aagaggtctagagttagtgcgccatttgtgttctgcgaagggctatttaagaagtctcaa
accaccattgatgttctccccgacgaatgccttttcgaaatattaagacgtgtttctgat
ggtcatgacaaaagtgcgtgtgcttctgtttcaaagcgctggcttatgcttgcaagcaca
attcgcagggatgagcaaaagaaggctgaagattttgataaaagtggcgggtgtcttaca
aggtgtttaaaagggaaaaaagctactgacattagacttgctgccattagtgctggatcg
ggtagccgtggtgggttaggtgaactctctatacttggaaataatgctagcaaggtgaca
gattttggacttaaagccgttgctcgtggttgtccttcccttacgtctctcacgatatgg
aatttgtcatccattaaagatgaaggcatttctgaaattgctaatgagtgtcgcctgtta
gaaaagcttgaactttctcattgccctgcacttaccaacaagtctttggtagctatcgca
gacaactgtcctaacttgtcttcactatcaatagattcttgctcaaacatcgggaatgaa
ggtcttcaagcaattggcaaatgctgtcttaacttaaagtcgatttcagtaaaaaactgc
ccgttggttggtgatcaaggggtttctagtgttgtggcatcggcatcatcttccctgatg
aaaatgagactccatggcttaaacatcagtgatgcgtctctagctgttattggacactat
ggtttagcgttgactgatttaggtttatatgatcttcgtaatgtaaccgagaagggtttc
tgggttatgggcagtggtcaaggcttacagaagttgaggtcaattgtaattgtggcctgc
agtggtgttaccgatctcggtcttgaagcactgggcaaaggctgcccaaacctgaagcac
ttttgtgttcgaaaatctgattttttatcagataagggtattgtgtcgtttgctaaagcc
actcagtcggttgaggttgtaatgctagaagaatgcaacactgttacacagcttggaatc
ttcggattacttgtgaattgtggtaatataaaagctctttcattggcaaaatgtttagga
atcaaggatttgcctatgataattccttcgggtttatctccatgtaattccatgaagtct
ttatccattgttaactgccctggatttggcaacattagcttggcgttgttgggtcgcatc
tgtccccagctgcaggatgttgtgttgactgggcttcaaggaattacagataacgggttc
agttcactcatcaagaactgtgagtctggcctaaccaaaattgatctcagcggttgtgtg
aacctaactgacaagactgtttcagaaatctctatggttcatggtgggacacttgaggtg
ttgaaacttgacggttgcagatcaatcactgatgcaagtgtggtcactgttgcacagaac
tgcttatttcttagggaacttgatgtttcaaaatccgcaatcactgatttctcaattgca
gctttggcttgtgctgaactactgaatctacaagttctatcagtttccggctgccaggtg
tcaaacaagagcctacctttcttgaagaagctgggggaaaccctcgtcggtttgaacctc
atgcaatgttgtggagtcagtggttctgcagttggtaaattgggagcgcaaatctataag
tgtgatatccttgtttaa
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