Erigeron canadensis (horseweed): 122581147
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Entry
122581147 CDS
T07610
Name
(RefSeq) probable pyridoxal 5'-phosphate synthase subunit PDX1
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00750
Vitamin B6 metabolism
ecad01100
Metabolic pathways
ecad01240
Biosynthesis of cofactors
Module
ecad_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
122581147
Enzymes [BR:
ecad01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
122581147
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GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
TetR_C_27
His_biosynth
NMO
Motif
Other DBs
NCBI-GeneID:
122581147
NCBI-ProteinID:
XP_043609245
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Position
9:complement(10657544..10660644)
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AA seq
308 aa
AA seq
DB search
MDGTGVVAVYGNGTLTETKKSSYSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACAVMA
LERVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMAKARIGHFVEAQILEAIGVDYVDES
EVLTLADDENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHV
RSVMGDIRVLANMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVQFAAGGVATPADAALM
MQLGCDGVFVGSGVFKSGDPARRARAIVQAVTHYTDPKLLAEVSCGLGEAMVGLNLDKNV
ERYASRSE
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggacggaaccggagtagtcgccgtctacggcaacggcacactaacagaaaccaaaaaa
tcatcatattccgtcaaagtgggtctagcccagatgcttcgtgggggtgtaataatggac
gtagtgaacgccgaacaagcccgaatagcggaagaagcaggggcttgtgcggtgatggca
ctcgaacgagtgccagcggatatccgagcccaaggcggagtggctcggatgagtgaccct
caactgataaaagaaataaaacaggcagtgactattcctgtgatggcaaaggcaagaatt
ggtcattttgttgaagcgcagatattggaagcaattggggttgattatgttgatgaaagt
gaggtcttgacattggctgatgatgaaaatcatattaataaacataattttaggatccct
tttgtttgtggctgtcggaaccttggtgaggctttgagaaggattcgtgaaggtgctgcc
atgattcggactaaaggcgaagctggaactggcaacatcattgaggcagtacgtcacgtt
agatctgtgatgggggacatcagggtccttgcaaacatggatgatgacgaggtgttcact
tttgctaagaaaattgctgctccgtatgatttggtgatgcagaccaaacaattggggagg
cttccagtggtccagtttgccgcgggtggtgttgctactccagctgatgcagcccttatg
atgcaactaggatgtgacggtgtgtttgtgggttcaggggtgttcaagagtggtgatcca
gcccgcagggcccgtgcgattgtccaggcagtcacacattacactgaccccaagttgctt
gcagaggtgagctgtgggctgggtgaagccatggtcgggttgaacctggacaagaacgtg
gaaaggtatgctagtcggtctgagtaa
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