Erigeron canadensis (horseweed): 122581219
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Entry
122581219 CDS
T07610
Name
(RefSeq) uncharacterized protein LOC122581219
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122581219
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecad03036
]
122581219
Chromosome and associated proteins [BR:
ecad03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
122581219
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
122581219
NCBI-ProteinID:
XP_043609326
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Position
9:2866602..2872431
Genome browser
AA seq
1305 aa
AA seq
DB search
MAIEKNSFKAVLSSRLDSEFSYRTKEESMSSEDVVEFGKRELDEEDDDFDDCDSGAGSDD
FDLLELGETGEEFCQIGDQTCSIPFELYDLSGLDDILSMDVWNDILTEDERLGLTKYLPD
MDQEHFMRTMKELFTGSNFHFGVPVNKLFEMLKGGLCEPRVSLYRQGLGFFQKQRHYHVI
RKHQNTMVNNLVQIRDAWSKCRGYSIEEKLRVLNIMKSQKSLMYEKMEELETDSSEESAD
GVWSNKKIKDHQQKLGQGQGQLQGQGRAHYPGYHTGQTLAFEPVNFGKPNSKGTLKVAGS
KMSITKEQGPYSSIEIKSGPSGSSPFNHKQTRDYEEKSMYDATVHRDFNMIDKMGKKYKG
FRGEEYPESFIGLPVPLQTDIHTFGRNRTVNQLSDIKVLTAKPSNSRYQYDYGKKVKRPE
NIQKIGVGDAFKYRNPGGINLSQIDNQQDMYPAGEPIWHNQLQGEPIDVPYRPGMKKGRH
VSTQNGGRVVIAAEGMKMLAKGEETESDSSEQYAEDDDDNPLMRSKWAYPSGVSGKSAPN
NKKSKVGGKKNYKTNKEFDGSAQSSRINGDFRDKQKGKTHGSILVNDFNGDGHIEGMFQA
PLRNTYPSGKKQKGEFVHDYFALPPTHINSYVPDEPGKFSKKSQMREAYGQGRHEMVDVR
LLGCNLGSKKRKVKDELIYLDDYDYQGHGQGQYDDGGYVKSAGKRKWAEEIPFESVISEA
PVMDTTEEDAELEIKTHKKPFILITPTVHTGFSFSIIHLLSAVRMAMVTLLPEDTGNDDN
KQEVANGDQGVTTSDAIANPKVPSLTVKDVVNRVRSNPGDPCILETQEPLQDLVRGVLKI
FSSKTAPLGAKAWKALVLYNKSSKSYSWVGPVSQISSDHEIVEEVTSPESWGLPHKTLVK
LVDSFANWLKSGQETLQQIGSLPPPPLALMQQNLDEKERFRDLRAQKSLNTISPSSDEVR
DYFRKEEVLRYLIPDRAFAYTAVDGKKSTVAPSRKGAGKPTSKARDHFMLKKDRPPHVTI
LCLVRDAAARLPGNIGTRADVCTLIRDSQYIVEDVSDAQVNQVVSGALDRLHYERDPCVQ
FDGERKLWVYLHRDREEEDFEDDGTSSTKKWKRQKKEPVEPSDPGVVTLACQGTGEQSGF
DLSSDQNNELPGINDARGLDLRSDLNAEPSGINDACGLDLRSDLNAEPSGINDARGLDLS
SKLNVGPSGISEACGLNLSSVRSVEPSGLSETRGLDLSSDLNIEPPGINEANGVDLSSDL
NVEPSGINEAHGLDNVLSCQKNSTDQDNDDGHEADVVELLNTSVS
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atggcgattgaaaagaatagttttaaagctgtgttaagtagtagattagattccgagttt
tcgtatcgaactaaggaagaaagtatgtctagtgaggatgtcgttgagtttggtaaaaga
gagttagatgaggaagatgatgattttgatgattgtgattcgggtgcgggttcggatgat
ttcgatttgcttgagttgggtgagacgggcgaggagttttgtcaaatcggggatcaaacg
tgtagcattccttttgagttgtatgatctttcagggttagacgatattttgtcgatggat
gtttggaacgacattttgacagaagatgaacggttaggtctgacgaagtatcttcctgat
atggaccaggaacattttatgagaacgatgaaggagcttttcacggggagtaattttcat
tttggggttccggtaaataagcttttcgagatgttgaaaggaggtttatgtgaaccacga
gtttcactttaccgacaagggcttgggttttttcagaaacaacgacattatcatgtaata
agaaagcatcagaacaccatggttaataacctagttcagatacgggatgcttggtcaaag
tgtcgtggttatagtattgaggaaaagcttcgtgttttgaatatcatgaaaagtcaaaag
agcttgatgtatgaaaaaatggaagaattggaaactgattcttcagaagaatccgcagat
ggtgtgtggagcaataagaaaataaaagatcatcaacagaagctgggtcagggccagggt
cagcttcagggacagggccgggctcattatcccggatatcatactggtcaaacattagct
tttgaacctgtgaattttgggaagccaaattcgaaaggaaccctaaaggttgcaggctca
aaaatgtctataaccaaagaacaaggcccatattcttctattgaaataaaatccgggcct
tcaggctcatcaccgtttaatcataaacagacgagagattatgaagaaaaatcaatgtat
gatgctactgttcatcgagattttaatatgatagataaaatggggaagaagtataaaggg
tttagaggtgaagaatatcctgaatcattcattggtttgcctgtgccgttgcagactgat
atacatacttttggtaggaatcggactgtaaatcagttgtcagacattaaagtgttgact
gcaaaaccatccaactcaagatatcagtatgattatggcaagaaggtcaaacgcccagag
aatattcagaaaattggtgtaggtgatgcattcaagtacaggaatccaggaggcataaat
ctttcacagatagataaccaacaagatatgtatcccgctggtgaaccaatttggcacaat
caattacaaggagaacccatagatgttccgtacaggccggggatgaagaaaggcaggcat
gtttctacacaaaacggaggacgagtggtgatcgctgcagaaggaatgaaaatgttagca
aaaggtgaggaaacagagtcggattcatctgagcaatatgctgaagatgatgatgataat
cctttaatgagaagcaagtgggcttaccctagtggtgtatctgggaaatctgccccaaat
aataaaaaatccaaagttggtggtaagaagaattacaagaccaataaagagtttgacggg
tcagctcaaagttcaagaataaatggtgattttcgtgacaaacagaagggtaaaacacat
ggtagcattttagtgaatgattttaatggtgatggtcatattgaaggtatgtttcaagca
cccttgagaaatacatatcccagtgggaagaagcagaaaggggaattcgtgcatgactat
tttgcccttccaccaacacacataaacagttatgttcctgatgaacctggaaagttttct
aaaaaaagtcaaatgagggaagcatatggtcaaggtcgtcatgaaatggtggatgtaaga
ttgttagggtgcaatttgggatccaagaagcgtaaagtaaaagatgaattaatatacttg
gatgattacgattaccaaggtcatggtcaaggtcaatatgatgatggcgggtatgtgaaa
agtgctgggaaaaggaaatgggcagaggagattccttttgaaagtgtaatttctgaggca
cctgttatggacacaacagaggaagatgcagagttggaaatcaaaacacataaaaaacca
ttcattttaataacacccactgttcacacaggtttttctttctcgattatacacctactg
tcggctgtaagaatggcaatggtcactctgcttccggaagataccggaaatgatgataat
aaacaagaagttgctaatggagatcaaggtgtaactacttctgatgctattgcaaaccca
aaagtcccttctttgacagttaaggatgtagtcaaccgtgtgaggtcaaaccctggagac
ccgtgtattcttgaaacacaagaaccacttcaagatctggtgagaggggttctgaagata
ttttcttcaaaaaccgctcctttgggagcaaaggcatggaaggcacttgtgttatataat
aagtcaagtaaaagctattcgtgggttgggcctgtttctcagatttcatcagatcacgag
attgttgaggaggtaacatctccagaatcttggggtcttcctcacaaaacgcttgtgaaa
ttggtggactcgtttgctaattggcttaaaagtggtcaagaaacgctgcagcaaatcggg
agtcttcctcctcctcctttagctttaatgcaacaaaatttggacgaaaaagagcgattt
cgagacttgcgagcgcagaaaagtctcaacacgataagcccaagctctgatgaggttcga
gattatttccgaaaagaagaagttcttagatatctaatacctgaccgggcttttgcatat
acagcagttgatggtaaaaagtcaactgttgctccatcaagaaagggtgcaggaaaaccg
acttccaaagcacgtgaccattttatgctgaaaaaggatcgaccgccccatgtgaccatt
ctttgcctggttcgagacgcggctgcacggctacctgggaatattgggacacgggcagat
gtttgtacgttaattcgggactcccaatatatagtagaagacgtgtctgatgctcaagtt
aatcaagtggttagtggtgcattggaccgtttgcattatgaacgggatccatgtgttcag
tttgacggggaaaggaagttatgggtgtatttgcatagggacagagaagaagaagatttt
gaggatgatggaacttcgtccactaaaaaatggaaacgacaaaaaaaagaaccagttgag
ccatctgatcccggtgtggttactttggcttgtcaaggaaccggtgagcaaagtgggttt
gatttgagttctgaccagaacaatgaactacctggcatcaatgatgctcgtgggttggat
ttgcgttctgacctgaatgctgaaccttctggcatcaatgatgcttgtgggttggatttg
cgttctgatctgaatgctgaaccttctggcatcaatgatgctcgtgggttagatctgagt
tctaaactgaacgttggaccgtctggtataagtgaagcttgtgggttgaatttaagttct
gtcaggagtgttgaaccgtctggccttagtgaaactcgtgggttggatttgagttctgac
ctgaatattgaaccgccgggcatcaacgaagctaatggcgtagatttgagttctgacctg
aatgttgaaccttctggcatcaatgaagctcatgggttggataacgtgttatcatgtcaa
aagaattctactgatcaagacaatgatgatggccatgaggcagatgttgttgagctcctg
aacacgagtgtatcttga
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