Erigeron canadensis (horseweed): 122581252
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Entry
122581252 CDS
T07610
Name
(RefSeq) 26S rRNA (cytosine-C(5))-methyltransferase NOP2B-like
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ecad03009
]
122581252
Enzymes [BR:
ecad01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
122581252
Ribosome biogenesis [BR:
ecad03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
122581252
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Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
Methyltransf_31
FtsJ
Motif
Other DBs
NCBI-GeneID:
122581252
NCBI-ProteinID:
XP_043609371
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All DBs
Position
9:14100354..14107100
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AA seq
622 aa
AA seq
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MGVRGRKKKLNITKTTQEEEVDFVSLNKKEKKDILSDDSDIEEHQQEEIVDRSDLSSDGE
EDDAFAADILQGDDDDEDDDKDVDQEMGSGSESDSDGSEKDIDDISKVIDIKRKKEQQDA
EDELQLNIREQPDEFRLPTQEELEEEARGPPDLTGLKQRIQEVVRVLSNFKDLRQEGVTR
KQYVNQLKLDLGSYYGYNEFLITSFIELFPPVELMEVLEAFEKPRPITLRTNTLKTRRRD
LAGVLLNRGINLDPLSKWSKVGLVVYDHQVPYGATPEYLAGHYMVQSASSFLPVMALAPQ
ENERIVDMAASPGGKTTYIAALMKNTGIIYANEMKEQRLSKLTSNLQRLGVTNTIVCSYD
GRELPKVLGHRAIDRVLLDAPCSGTGVISKDESVKTSKSAADVQNCSRLQKELILAAIDM
VDANSKSGGYVVYSTCSMMVIENEDVIDYALKKRDVKLVPCGLDFGTKGFKCFRERRFHP
SLELTRRFYPHVNNMDGFFVAKLQKMSNLEGAPATISELQEVVEEGTEFEPSTAQIPKAE
IALPQKNRPVIKESQKSIRKNGSLKRKKEENSVPTGKRKKYKPPPREEISKAREEKRQAL
REAKKKATKETKFRSKKATPAV
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgggtgttagaggtagaaagaagaaattaaacatcaccaaaacaacacaagaagaagaa
gtagactttgtttctcttaacaagaaggagaaaaaagatattttgagtgatgactctgat
attgaagaacatcaacaagaagagattgtggataggtctgatttgtcttcagacggcgaa
gaagacgatgccttcgctgccgatattttacaaggcgacgacgacgacgaagatgacgac
aaagatgttgatcaagagatgggatcagggtcggagtcagattctgatggttccgaaaaa
gatattgatgatatatccaaagtcattgatattaaaagaaagaaagaacaacaagatgca
gaggatgaactacagcttaacatcagagaacaacctgatgagtttcggttgccgacacag
gaggaacttgaagaggaggctcgtggaccacctgatctcactggtcttaaacaaagaata
caagaggttgttagggtgctctcaaattttaaagatttgagacaagagggagtaacgcga
aagcaatatgtaaaccaacttaagttggatttgggttcatattatggctataatgagttc
cttataacttctttcattgagctgtttccacctgttgaacttatggaagtgcttgaagcc
tttgaaaagcctcgacctattaccctccgtaccaacacattgaagacacgaagacgagac
ttagctggtgttttgttgaatcgaggaatcaacttagaccccctaagcaagtggtcaaag
gttggtctggttgtttatgatcatcaagtaccatatggtgcaacccctgagtatttggct
ggtcattacatggtgcaaagtgcaagctcttttttacctgttatggccctcgctcctcag
gagaacgagcggattgttgacatggcggcttctcctggtggtaaaacgacttatattgca
gctctgatgaagaacactggtataatttacgctaatgagatgaaggagcagaggctaagt
aaactgacatcaaatttacagagattgggtgtcacaaacactatagtatgcagctacgat
gggagagagcttcccaaagttttgggtcacagagcaatagacagggttttgttggatgct
ccttgcagtggtaccggggttatatctaaagatgagtctgtcaaaacctcaaaaagtgct
gctgatgtgcagaactgttctcgtctacagaaggaacttatactcgcggctattgacatg
gtggatgcaaattcaaagtcagggggttatgtggtttattcaacatgctctatgatggtt
atcgagaatgaagatgtaatagactatgcactaaagaagagggatgttaaacttgtgcca
tgtggattagactttggtaccaaagggtttaaatgctttagggaacgtcgttttcatccg
tcattggaattgacaagacgtttttatccacatgtgaacaacatggatggcttttttgtt
gcgaagttacagaaaatgagtaatttagagggtgctccagcgacaatttctgaactgcaa
gaagtcgtggaggaaggtactgagtttgaacctagcactgcacagatcccaaaagcagaa
atcgcgctgcctcagaagaaccgtccagtgattaaagagagtcaaaagtcgatccgtaaa
aatggttctcttaaaagaaagaaagaagaaaattctgtacccaccgggaagaggaagaaa
tataaacctcctcctagagaagagatctcaaaagccagggaagagaagagacaagcttta
agagaagccaaaaagaaagctaccaaggaaacaaaattccgaagcaagaaagccacacct
gcggtatga
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