Erigeron canadensis (horseweed): 122581278
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Entry
122581278 CDS
T07610
Name
(RefSeq) syntaxin-132-like
KO
K08486
syntaxin 1B/2/3
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
122581278
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122581278
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecad04147
]
122581278
Membrane trafficking [BR:
ecad04131
]
SNARE
Syntaxin (Qa)
Stx-PM
122581278
Exosome [BR:
ecad04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
122581278
Exosomal proteins of other body fluids (saliva and urine)
122581278
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
DUF2383
YceG_bac
DUF6584
cwf21
DUF6548
T2SSF
EVI2A
Bestrophin-like
IL34
YcbB
Motif
Other DBs
NCBI-GeneID:
122581278
NCBI-ProteinID:
XP_043609413
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Position
9:complement(32528250..32532812)
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AA seq
308 aa
AA seq
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MNDLLSESFENPRGQGYGGGDLEMGTQREASSGELGLDEFFKKVQAIEKQYEKLNKLLKK
LQDAHEESKAVTKAAAMKAIKQRMEKDVDEVGKIARFIKSKIEELDKENLANRQKPGCGK
GTGVDRSRTATTLSLKKKFKDKMSEFQALRESISQEHREVVERRVYTVTGARADEETIDK
LIETGDSEQIFQKAIREQGRGQVLDTLAEIQERHDAVREVERKLLELQQIFMDMAVLVDA
QGEMLDNIETQVSNAVDHVQDGNKALFKAKSLQKNSRKWMCIAILILLIIIAVVVVGVLK
PWKSGNGA
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaccttttatctgaatcatttgagaatcctcggggtcaaggttatggcggtgga
gatcttgaaatgggaacacaacgggaagcgagttccggggagttgggcttagatgaattt
ttcaagaaggttcaagccatcgagaaacaatatgagaaacttaataaactactaaaaaag
ttacaggatgctcacgaggagtcaaaggctgtaaccaaggcggccgctatgaaagcaatc
aagcagcggatggagaaagatgtggatgaagttggaaagattgctcgatttattaaatct
aaaattgaggaacttgacaaagagaacttggcaaacagacaaaagcctggatgtggaaaa
ggaacgggagttgaccgatcaagaacggccactaccctctcattgaagaagaagtttaaa
gacaaaatgtcggaatttcaggctcttagagaaagtatcagtcaagagcatcgtgaggtg
gttgagaggcgtgtatatacagtgaccggagctcgggccgatgaagagacaattgataaa
ctcatagagacaggtgacagcgaacagatatttcagaaagcaatccgggaacaaggacgg
ggacaggttcttgacacactggccgaaatccaagaacgccatgatgcagtgagagaagta
gaacggaaacttcttgagttgcaacagatatttatggatatggctgtattggtggacgct
caaggggaaatgctagacaacattgagacacaggtttcgaatgcagtagaccatgtgcag
gatggaaacaaagcccttttcaaggcaaagagtctacagaagaactcgagaaagtggatg
tgtattgctatcttgattttactcattatcattgcagtcgtcgtcgttggtgtgctgaag
ccatggaaaagtgggaatggcgcttag
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integrated database retrieval system