Erigeron canadensis (horseweed): 122581332
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Entry
122581332 CDS
T07610
Name
(RefSeq) two-component response regulator ARR2-like isoform X1
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
122581332
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecad03000
]
122581332
Transcription factors [BR:
ecad03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
122581332
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
DUF7024
Motif
Other DBs
NCBI-GeneID:
122581332
NCBI-ProteinID:
XP_043609481
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All DBs
Position
9:complement(36885171..36889242)
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AA seq
682 aa
AA seq
DB search
MNLGVVNKHQSMMPSSSGTSWKSAGAGAGDGGVPDQFPAGLRVLVVDDDPTCLMILETML
RRCNYEVTRCNRAEIALRHLRENKNGFDVVISDVHMPDMDGFKLLEHIGLEMDLPVIMMS
ADDSKSVVMKGVTHGACDYLIKPVRIEALRNIWQHVVRKRKHEWKDIEQSASADEQKPPE
EPDYSSSANEGHNWKNSKRRKDDDDETDERDDSSSLKKPRVVWSVELHQQFVAAVNQLGI
DKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGSQHPGGMATGFMGSSDAGYGSM
SSLNGIDLQALAASGQLGQLPPQSLATLQAAALGRSNNSKSPISVPVIDQRNIFSFENPK
SRYTEVQSQHLTNNSSGKQLNLLPGIPTNMEPKQFVSLQQSAQHPFGSMNNQVLIQMGGQ
SHIQNHIQSQAQSSTNPHHGLRQPVLSSEMLTRGGVVDMATPVYNPAVSQTSSLVDFSVN
HKTDSSGSSYPHGGSLGIPSLSAASSTLQGSGKLDTKVSLRNILPSYDIFNDLNQNGSRD
WGGLQDVGLNFDPSPHTMQGGLDASSPMLLQHNRSSGVEMGGHNRNLTGGNKVIFSQGVE
ARTHHNGSNAGQQRNTYIGDSSFRVKTESEHDGSSQNTLYQDQYGQDDLLAAILKQQQQQ
EGIGQPENEFGFDGYALDDLPA
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttggcgttgttaataaacatcagtcaatgatgcccagttcaagtggtacatct
tggaagtctgccggcgccggtgccggagatggtggtgtacctgatcagtttccggcaggt
ctacgtgtacttgttgttgatgatgacccaacttgtcttatgatccttgagactatgctt
agacgttgcaactatgaagtgactagatgcaacagagctgagattgctttgagacatctg
agagaaaataaaaatggatttgatgtcgtgataagtgatgttcatatgcccgatatggat
ggattcaaactccttgaacacattggtcttgaaatggatctccctgttatcatgatgtca
gctgatgacagcaaaagtgtagtaatgaagggtgttactcatggggcgtgtgattacttg
ataaagcccgttcgtattgaggcattacgtaatatatggcaacatgtggttcgaaaacgg
aaacacgagtggaaagacatcgagcagtcagcaagtgcggatgagcagaaaccaccggaa
gagcctgactactcttcttctgcaaatgaagggcataattggaaaaactcgaaaaggaga
aaagatgatgatgatgaaactgatgaaagagatgattcttcttctttgaagaagcctcga
gttgtttggtctgttgaactccatcaacagtttgtagcagcagttaatcagcttggaatt
gataaggctgtcccgaagaaaatcttggagctgatgaatgttcctggattaactagagaa
aacgttgctagtcaccttcaaaaatatcgcctttatcttagaagactcagcggttcccag
catccaggtggaatggcaacaggatttatgggaagctcagatgcaggctacggatcaatg
tcgtcacttaatgggattgatctacaagctctagctgcaagtggtcaactgggtcaactc
cctccccaaagtctcgcaactcttcaagctgcagctcttggcaggtcgaataactccaag
tctcctatttccgtgcccgttattgatcaaagaaatatttttagctttgagaatccaaag
tcaagatacacggaagtccaaagtcaacatttgaccaataatagcagtggtaagcagttg
aatttacttccaggaattccaacaaacatggagccgaagcagtttgtgagtttgcaacag
tcagcacagcatccttttgggagcatgaataaccaagttctaatacagatgggtggtcaa
agtcatattcaaaatcatattcaaagtcaagctcagtcgagcacaaaccctcatcatggt
ttgaggcaacctgtcttgtctagtgagatgttgacacgtgggggagtggttgacatggca
acgcctgtgtacaatcctgcggtatcacaaacctcatctctcgtggatttctcagtgaat
cacaaaaccgattcatctggaagtagttatcctcacgggggtagtttgggaattccaagt
ctttccgctgcatcatcaaccctccaaggaagtgggaagttagatactaaggtctcatta
agaaatattcttccaagttatgatatttttaatgatctgaatcagaacggatcacgtgat
tggggtggtttacaagatgttggtttgaactttgacccatctccacatacaatgcaagga
ggattggatgcatcgtctccaatgttactccaacataaccgttcttctggagttgaaatg
ggagggcataaccgtaatctaactggtggaaataaggtgatattctctcaaggtgttgaa
gctagaactcatcataatgggtcaaatgctggtcaacaacgtaacacttatatcggggac
agttcatttagagtcaaaaccgaaagtgagcacgatggaagctctcaaaacacattatat
caggatcagtatggccaagatgatctgctagctgcaattctaaagcaacagcaacaacaa
gaaggtattggacagccagaaaacgagtttggctttgatgggtatgcattagatgatcta
cccgcctaa
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