Erigeron canadensis (horseweed): 122581405
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Entry
122581405 CDS
T07610
Name
(RefSeq) E3 ubiquitin-protein ligase UPL4
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122581405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122581405
Enzymes [BR:
ecad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
122581405
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
HECT type E3
122581405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
ARM_ARMC5
Arm
Motif
Other DBs
NCBI-GeneID:
122581405
NCBI-ProteinID:
XP_043609568
LinkDB
All DBs
Position
9:33438916..33448600
Genome browser
AA seq
1513 aa
AA seq
DB search
MGNRGQKRADSPEELPADKRACSSLEFRPSSSTSPVETTSTSTANQTPDQEMEESSSASD
THEDNNSAYGSCDSDEMGDVEQRRNRREMADYQRQRLSGDQVKFKRVLSNLNEQTEESEQ
QDALRELCEILSFCTDSSLSSLMADSLSPILIKLAGHESNPEIMLLSIRALTYLCDSHPR
SSSFIIRHDGILVLCKRLLAFEYEDVAEQCLQALEKISREQPLACLQSGAIMAVLTFIDF
FSTSTQRVALSTVVNICKKLPSEGFSQFMDAVPILCRLLEYEDNQLVEHVGTCLIKIVER
VHQSPEMLDELCKHGLIHQIAHLVDLNSRTTLSYSVHTGLIGLLVKLASGSMIAVSTLFD
LNISNILKDILSTYDLSHGMPSPRAVDGHSNQVHEVLKLLIQLLPVVARNDGVQLAEEKA
AFLMNHPDLLQKFGNDLLHVLIQVVDSGVDLHVCYGCLSVIDKLVYYSNPDTLLDLLKQN
NISRFLAGVFTRKDQHILLLALSISETILKKTSDVFVGPFVKEGVLFAIDALISPEKGSQ
FMFTMFNDIHLSNNSTIRTCLCSSFDICSLASTSESRACKLEKDCVQTLAKHIRTNYFET
NSTTSANATTAILEKLKSLSAELASMMTDGMVEEEYERVLHQIMSHLNGGDVISTFEFVE
SGITGSLFSYLSSGECSGRNAVNSGSKIQPCIAERRLETFGRLFWSNFSLSEFILKLQSA
LSSVEDFPVVLNSVSKQRNSYATVPYKRGTTYPCLKVLFEKEEGELTLSDYSGDVQNVDP
FSHFDAIEKFLWPKVCSNNNKDTSPPMKVADEDGSSAQSPSDTSRHNVGQTSSESSSGNE
VRTDSMEIDQHASQKDSSMEIDQQASQKDSSISSEHPEASINDGQLLFYLEGKLMDRELT
IYQAILRHHKAEYDTISHATLWNQIHKVAYKKASNLEKSSSLLLGCHACLSASLEKPTLC
APFYSHMLFSEIGSAVVKSTPCHDLLFLLRTLEAVNRFRFHIMSNENISAFAEGRISDLD
GVKATGVGILGVLKNEFVNSRLTEKLEQQMRDPLAISTGGMPSWCKQLMTSCPFLFSFEA
RCKYFRLVALGKHQGQPLVSSGSSSRIQSDASMARKKFLVYRHKILESAAKMMDLNANQK
VVLEVKYDEEVGTGLGPTMEFFTLVSNEFQKPGLRMWRGDNVSGALFECLGNPDSVLVAS
PFGLFPCPWCQSISVSSGMDFSEVKRKFVLLGQIVAKAIHDGRILDLPFSKAFYRLILGQ
ELTMYDIQSFDPVLGKTLIEFRALVERRKYLELIGQSSAVNHDPCFRDTKIEDLHLDFTL
PGYPDFMLVSGPDKEMVNTTNLEEYIELVVDATINSGISKQMDAFKSGFNQVFPINHLQI
FTDEELERLLCGESETWNANQLSDLIKFDHGYTASSPPIIHFLDIMQEFDQEQQKAFVKF
VTGAARLPLGGLASLNPKLTIVRKHCDKVADADLPSVMTCANYLKLPPYSSKETMKEKLL
YAITEGQGSFHLS
NT seq
4542 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaccgggggcaaaaacgagcagactctcctgaggagttgcctgcagataagagg
gcatgtagttcgttggagttcaggccaagttcatcgacgtcaccagtagaaaccacaagt
acgtccactgcaaatcaaacccctgatcaagaaatggaagaatcgtcgtctgcttctgat
acacatgaagataataattctgcatatgggtcatgtgattctgatgaaatgggtgatgta
gaacaaagaaggaatagacgagagatggctgattaccaaaggcagaggttatcgggggat
caagtgaaattcaagagggtattatcaaatttgaatgaacaaactgaggagtctgaacaa
caggatgcccttagagaactctgtgaaatattatctttttgcacagatagttctttatcg
agtttgatggcggactcgttatcccctatacttataaagttggctggccatgaaagtaac
cccgagattatgcttttatctattagggctttaacttatctatgtgacagtcatcctcga
tcctctagttttatcattagacatgatggaattttggtactatgtaagagattgctggcc
tttgagtacgaggatgtagctgaacagtgtttgcaagcattagagaaaatatcacgtgag
cagccacttgcgtgcttacagtctggtgcaataatggccgttcttacctttatcgatttc
ttttcgaccagtacacagagggttgctctttccacggtggtgaacatatgcaagaagctt
ccatctgaaggtttttcgcagtttatggatgcagttccaatattgtgcagacttctggaa
tacgaagacaatcagcttgttgaacatgttggtacttgcctaattaaaatagtggaacga
gtacatcaatcccctgagatgttggatgaactttgtaaacacgggctgatccaccagatc
gcacatcttgtagacttgaacagccggaccactctatcttattctgttcatactggtctg
attgggctacttgttaaacttgcttctggttcaatgatagctgtgagcacgctttttgat
cttaatataagcaacattttgaaggatatattgtcaacatatgatctttcacatggaatg
ccttcccctcgggcagttgatggtcatagtaatcaggtgcatgaagtcttgaagttgttg
attcagcttctgcctgttgtagctagaaacgacggagttcaattggcagaagaaaaggca
gctttcttgatgaatcatcctgatcttctgcagaagtttgggaatgatttattacatgtt
ttaatccaggttgttgattcaggtgtagatttacatgtatgttatggatgcctatctgtt
atcgacaagttagtttattacagcaaccctgatacgcttcttgatttgctaaagcaaaac
aacatttcaaggtttttggctggtgtgttcactcgtaaggatcaacatattcttctgctt
gcccttagtatttctgagaccatccttaaaaaaacttctgatgtattcgtgggacccttt
gtaaaggaaggagttctttttgccattgatgcacttatatctccagagaagggttcacag
tttatgtttacaatgttcaacgacattcatctatcgaataattcaactataagaacatgc
ttatgctcttcttttgacatttgctcgttagcatcaacttcagaatcacgtgcttgtaag
ttggaaaaggattgtgttcaaactcttgcaaaacacataagaactaattacttcgagaca
aactcgaccacctctgcgaatgcaacaactgctatcctggaaaagcttaaatctttatct
gctgaattagcttcaatgatgactgatgggatggttgaagaagagtatgaacgtgtcttg
catcaaattatgtcacatctaaatgggggagatgtgatttctacttttgaatttgttgaa
agcggaattaccgggtcgttgtttagttatttatctagcggtgaatgttctggaagaaat
gccgtcaatagtgggtcaaaaattcaaccctgcattgcagaaagaagactggagactttt
gggagacttttttggtcaaacttttcattatctgaatttattttaaaattacaaagtgcg
ttatcttctgtcgaagattttcccgtagtattgaatagtgtatccaaacagagaaattcg
tatgctactgttccgtataagcgtggtaccacttatccttgtctgaaagttttgtttgag
aaggaagagggagagttgacattaagtgactactcgggagatgttcaaaacgttgacccg
ttttcacattttgatgcaattgaaaagttcttatggcctaaggtttgttcaaacaataac
aaagatacaagtccacccatgaaggtggcagatgaagatggctccagtgctcaatcaccg
tcggatacaagtcgccacaatgtcggacagactagttctgaatcatcaagtgggaatgaa
gttcgaactgactccatggagattgaccaacatgcttcacaaaaagatagtagcatggag
attgaccaacaagcttcacaaaaagatagcagcatcagcagtgagcaccctgaagccagt
ataaatgacggtcaactattgttttatctcgaaggaaagctgatggatcgggagttgacc
atatatcaagccatacttcgacatcacaaagcagaatatgacactatcagtcatgcaacc
ttatggaatcaaatacataaagtagcatacaaaaaagcatcaaatttagaaaaaagtagc
tccttgcttcttggctgtcatgcatgtttgtcagcttccttggaaaagcctacattatgt
gccccgttttattcacacatgcttttttctgaaattggttcagcagtggtaaagtcaact
ccctgtcatgatttgttgtttttgctgagaactttggaagctgtgaacaggtttaggttc
catatcatgtctaacgaaaatatatcagcttttgctgaaggcagaattagtgacttagat
ggtgtaaaagcgacaggtgtgggtattctgggcgttctgaagaatgagtttgtaaatagt
aggttaacagaaaagctagagcagcagatgcgggacccattagccatctctactggtgga
atgccatcatggtgtaaacaattaatgacatcatgccctttcttatttagttttgaggct
agatgcaagtacttccggttggtggcactaggtaagcatcagggtcaacccctggtatca
tcaggctcatcctcacgtatccaaagtgatgcttctatggctcggaaaaagtttttggtt
tatagacataagattctcgagtcagctgccaaaatgatggatctaaatgccaatcagaaa
gtcgttcttgaggtgaaatatgatgaagaagttggtacaggacttggcccgacaatggag
ttctttactctggtaagtaatgagtttcaaaagccaggcctcaggatgtggcggggagac
aatgtctcgggggctttatttgaatgcttaggaaaccctgattctgtgcttgttgcatct
ccatttgggctctttccgtgcccatggtgtcaatccattagtgtctcaagtggtatggat
ttctcagaggtgaaaagaaaatttgttcttctgggccagattgtggcaaaggctattcat
gatggacggattttggatctccccttctccaaagctttctatagactaatccttggacag
gaactcactatgtatgacatccagtcatttgaccctgttttgggtaagacccttatcgag
tttcgggctcttgttgagaggagaaagtatttagaattaattggacagagttcagctgtt
aatcatgatccatgcttccgagatacaaaaatcgaggatttgcacctggattttactctt
cctggttatccagatttcatgcttgtatctgggcctgataaagaaatggtgaatacaaca
aatttggaggaatacattgaacttgtggtcgatgccacaataaattctggaatctctaaa
caaatggatgcttttaaatcaggatttaatcaggtttttccaataaaccatcttcagata
ttcactgacgaggaacttgaacgtcttctatgtggagaaagtgaaacttggaatgcgaac
cagctttcagatctcattaagtttgatcatggatatactgccagcagtcctcctattata
cattttctagacatcatgcaagaatttgaccaggagcaacaaaaagcttttgtgaagttt
gtgactggtgccgcacggcttcctcttggtggtttggcatcgcttaacccaaaactcact
atcgtgcgcaagcattgtgataaagtggcggatgctgacctccccagcgtgatgacatgt
gctaattatctcaaattgcctccatactcttcaaaggaaacaatgaaggaaaagctctta
tatgcaataacagaaggccaggggtcgtttcatctttcctaa
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integrated database retrieval system
