Erigeron canadensis (horseweed): 122581444
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Entry
122581444 CDS
T07610
Name
(RefSeq) heat stress transcription factor A-5
KO
K09419
heat shock transcription factor, other eukaryote
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecad03000
]
122581444
Transcription factors [BR:
ecad03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
122581444
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
DUF3450
TMF_TATA_bd
Uso1_p115_C
DUF7801
APG6_N
ABC_tran_CTD
Motif
Other DBs
NCBI-GeneID:
122581444
NCBI-ProteinID:
XP_043609611
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All DBs
Position
9:complement(28795831..28798989)
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AA seq
454 aa
AA seq
DB search
MDGNQTSGGGGGGGPAPFLLKTYDMVDDSMTDEIVSWSTNRNSFVVWNPPEFARLLLPTY
FKHNNFSSFIRQLNTYGFRKIDPERWEFANEEFMKDNKHLLKNIHRRKPIHSHSTNPQSS
TVDPERAAFDEEIDKLTREKSSLEKSVMRFKQQQPATKLQLEDLTQRVNSIEQKQDNLLT
FLKKASQNPEFVKHLSQKLESMDFSADNKKRRLPQSQVSPEDSLVDNHSPSRPDSGNGFH
HDFSNKLTLELSPSVSDVNFVSNSTQSSNEDGGSPRIRLSENYTRNTDMTPGRLPYTPET
QELSDTCTSFAFNMESSFMQKTAPNLAANEEPEGHLSCQLNLTLASSVSQIDPSQDSDTI
PQSIEGIGKPAGEIVTLSSSNHKPINNAGTAAPTSNQPRVNDVFWEQFLTERPGSSDIED
ASSNLRAAPSYDQEDIKTDHGSYENSRNFRNLTL
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggacggaaatcagacatccggtggcggtggaggtggaggtccggcgccgtttttgtta
aaaacatacgacatggttgatgattcaatgacagatgagatagtgtcgtggagcacaaac
agaaacagttttgtggtttggaatccgcctgagtttgccagattattattgcctacttat
ttcaaacataataacttttccagctttattcgacaacttaatacttatggtttcagaaag
attgatcccgaaagatgggaatttgctaatgaagagtttatgaaagataataagcacctt
ctaaagaacattcatcgtagaaaacctattcacagccacagtactaatcctcaatcttca
actgttgaccctgaaagagcagcttttgatgaagaaattgacaaacttacacgcgaaaag
agttcgcttgaaaaaagcgttatgaggtttaaacaacagcaacccgctacaaaacttcaa
ctggaagaccttactcaacgtgttaacagtatagaacaaaaacaggataacctgttgaca
tttttgaaaaaagcatctcaaaatcctgagtttgtcaagcacctttctcaaaaactcgaa
tccatggatttttcagctgataacaagaaaagaagattgccccagtctcaggtttcccca
gaagatagtcttgtagacaaccatagcccatctaggcccgattctgggaatggatttcat
catgatttctcaaacaaacttacgctggagctatcaccatctgtttcagatgtcaacttt
gtttcaaacagcacccaaagctctaatgaagacggtggaagtccacgtatcagattatct
gaaaactacactagaaataccgatatgacacctggcaggctcccttatacaccagaaact
caagagctttctgatacctgcacatcattcgcttttaacatggagtcttcttttatgcaa
aagactgccccaaacttagctgctaatgaagaacctgagggccatttatcttgccagttg
aatctcactttagcatcttctgtttcacaaatcgacccatctcaagattcagatacaatc
ccccaatccattgagggtattggcaaacctgcgggtgaaattgtgactttatcttcctct
aatcataaaccgattaataatgcagggactgcagcacctacaagtaatcagcctcgggtg
aatgatgttttctgggagcagtttttaacagaaagacctggttcttcagatattgaagat
gcaagctcaaatttgagggccgcaccttcatatgatcaagaagatataaaaactgaccat
ggatcgtatgagaattcaaggaacttccgaaatctgactctttaa
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