Erigeron canadensis (horseweed): 122581586
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Entry
122581586 CDS
T07610
Name
(RefSeq) sorting nexin 1 isoform X1
KO
K17917
sorting nexin-1/2
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122581586
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122581586
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ecad04990
]
122581586
Membrane trafficking [BR:
ecad04131
]
Endocytosis
Macropinocytosis
Sorting nexins
122581586
Domain-containing proteins not elsewhere classified [BR:
ecad04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
122581586
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
BAR_3_WASP_bdg
COG5_N
Motif
Other DBs
NCBI-GeneID:
122581586
NCBI-ProteinID:
XP_043609756
LinkDB
All DBs
Position
9:complement(2407683..2417962)
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AA seq
403 aa
AA seq
DB search
MITTQTRSGNGGGGLQSPRSPQQQYLTVSVTDPAKMGNGVQAYISYKVITKTNFPEYQGP
EKIVIRRYTDFVWLRDRLFEKYKGIFIPPLPEKSTVEKFRFSTEFIEMRRQALDTFVNRI
ALHHELQQSEDLRTFLQADEQTMERARSQDTGIFKKKPSDLMQIFRDVQSKVSDVVLGKE
KPVEETNQEYERLKRYIFELEDHLAEAQKHAYRLVKRHRELGQSLADFGKAIKLLGACEG
DALGTAFSELGAKSEMLSIKLQREAHHLLMNFEEPLKDYVRAVQSIKGTIAERANAFRQQ
CELMETIKLKEIDVNKLRLTRSEKMLDVEHELEELKAAAEEAKGRFETIVRLMNEEIVRF
QDQKTQDMGQAFHEFAKGQARLANGIADAWRSLIPKLDSLSAS
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgatcacaacgcagacaagaagtggaaatggcggtggaggattacaaagccctagatct
cctcaacaacaatatttaactgtatcagttactgatcctgctaaaatgggaaatggtgtt
caagcttatatctcttataaggtcatcactaagacaaacttccccgaatatcagggacca
gaaaagattgtgattcgacgatatacagattttgtttggctacgcgatcgtctgtttgaa
aagtacaagggtatcttcattcctccacttccggagaagagcactgtagagaagttcaga
ttcagtaccgagttcattgagatgaggcgtcaagcactggatacatttgtcaataggatt
gcattacatcatgaacttcagcaaagtgaagacctacgaacgtttttgcaggctgatgag
cagacaatggaaagagcaaggtcacaggatactggaatcttcaagaagaagccgtctgat
ttgatgcagatattcagggatgttcaatctaaagtgagtgatgtagttctagggaaagaa
aaacccgtggaagaaacaaatcaggagtatgagagactgaaacgctatatatttgagctt
gaagatcacttggctgaagctcagaagcatgcataccgactagtcaagcgacacagagag
ttggggcaatctctagcagattttggcaaggcaatcaagcttctgggtgcttgtgaaggt
gatgcacttggtactgcattctccgagcttggagcaaagtcagagatgctatcaattaag
ctgcaaagagaagcacaccatcttttaatgaattttgaagaacctttgaaagattatgtg
cgtgctgtgcaatctatcaagggcacaatagcagagagggctaatgctttcaggcagcag
tgtgaattgatggagacgataaagctaaaagaaatcgatgtaaacaaattgaggctaact
cgatcggagaaaatgttagatgtggagcatgaactagaggagctgaaagctgctgctgag
gaagcaaagggaagattcgagacaatagtacggttgatgaatgaagaaatcgtgcgtttc
caagatcagaaaacacaagacatgggacaggctttccatgaatttgcaaagggccaagca
cgcctagccaatggtattgctgatgcttggagaagtctcattccaaaactagactctctc
tctgcctcgtaa
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