Erigeron canadensis (horseweed): 122581690
Help
Entry
122581690 CDS
T07610
Name
(RefSeq) E3 ubiquitin-protein ligase HAKAI homolog
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecad03019
]
122581690
04131 Membrane trafficking [BR:
ecad04131
]
122581690
04121 Ubiquitin system [BR:
ecad04121
]
122581690
Enzymes [BR:
ecad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122581690
Messenger RNA biogenesis [BR:
ecad03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
122581690
Membrane trafficking [BR:
ecad04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
122581690
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122581690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
122581690
NCBI-ProteinID:
XP_043609877
LinkDB
All DBs
Position
9:266505..269374
Genome browser
AA seq
368 aa
AA seq
DB search
MLQIRLSNKATASETGKLPSGETVTVACPDHLVLAELPVAKSLGYTNGVTPVKTVGRRSR
RPLGERVHFCVQCDFPIAIYGRLIPCEHAFCLDCARSDSLCYLCDDRIQKIQTIKMMEGI
FICAAPHCLKSFLKKSDFEAHVHAVHADLINSNPQKDVNESEAASTKKPTTSDSTVQAPT
PRPVQDSEDRTPRPQPQPPVRPLIQPNPNPPHGFDGPTPMQIQQQNFEYPMNTLQPPNFV
LPVNPHVMGPGLFGQPLYPGQQASEAGVEQGSLLGYPQPWNVGPNGVLFDPSMMMNQGGF
FQGGPPSNIPQGGNANPSLPPPPPPLPPAFAQIPGNFYGGGDSSHHGQGPPGYSWPQDKR
DGFGNGQD
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgcttcagattcggcttagcaacaaagctaccgcttcagaaactggcaagctcccttct
ggggagaccgtcacggttgcatgcccagatcatcttgttcttgccgagcttcctgttgcc
aagagtcttggttacactaatggtgttacccctgttaagactgttggtcgtaggtcacgc
cgcccccttggtgaacgtgtccacttctgtgttcaatgtgatttccccattgctatctac
ggacgtctgattccttgtgagcatgctttttgcctggattgcgccaggagtgactctttg
tgctatctgtgtgatgaccgtatacagaagattcagacgattaaaatgatggaaggcatc
tttatatgtgcagcaccacattgtctaaagtccttcctaaagaaatccgactttgaggct
cacgtacatgcggtccatgcggatctaattaattcaaatcctcaaaaagatgtaaacgag
tcagaagctgcaagcaccaagaaacccacaacttctgattcaactgttcaagccccaact
ccaagaccagtccaagatagtgaagaccgaacacctcgtccccaaccccaaccccctgtc
agaccactgattcagccaaatcctaacccgccacatggttttgatgggccaacgccaatg
caaattcaacaacagaattttgagtaccctatgaacacactccagcctcccaattttgta
ttaccagtgaacccacatgtgatgggccctggattatttggccaacccctttatcccggt
caacaggcttcagaagcaggtgtggaacaagggtcattgctcggttatcctcaaccttgg
aatgttggaccaaatggtgtgctgtttgacccttctatgatgatgaatcaaggtggtttc
tttcaaggaggtccaccatcaaacattccgcaagggggaaatgctaacccatcactccca
ccaccaccaccccctctacctccggcatttgctcaaataccagggaatttctatggtggt
ggtgattcaagtcaccatggacagggtccaccagggtactcgtggccacaagacaagcgt
gatggctttggaaatggtcaagattaa
DBGET
integrated database retrieval system
