Erigeron canadensis (horseweed): 122581779
Help
Entry
122581779 CDS
T07610
Name
(RefSeq) probable CCR4-associated factor 1 homolog 6
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122581779
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecad03019
]
122581779
Messenger RNA biogenesis [BR:
ecad03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122581779
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
122581779
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
122581779
NCBI-ProteinID:
XP_043609993
LinkDB
All DBs
Position
9:36919783..36921504
Genome browser
AA seq
283 aa
AA seq
DB search
MGEIMDNNMSDVMPNSDSIEIREVWNANLEEEFDLIREIVDDYPYIAMDTEFPGVVLRPL
AQFKNINDYNYHTLKDNVDMLKLIQLGLTFSDENGNLPTCGSEKHCIWQFNFREFNVNED
IFANDSIEMLRQCGIDFEKNTQMGIDACRFGELLMSSGIVLNPNICWVTFHSGYDFGYLL
KLLTRKELPKTQEGFFNLINVYFPMVYDIKHLMRFCNHLHGGLNKLAEILEVKRIGVCHQ
AGSDSLLTSHAFKKLKESYFDGATEKYAGVLYGLGVESEVQNK
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaataatggataataatatgtctgatgtgatgcccaatagtgattcaattgaa
ataagagaggtatggaatgctaatctagaagaagagtttgatttgattcgagaaatcgtt
gatgattacccatatattgctatggataccgagttccctggggttgtgttaaggccttta
gcacagtttaagaatattaatgattataattatcatactttgaaggataatgtcgatatg
ttgaagttaatacaattaggtttgacgttctctgacgagaatgggaatcttcctacgtgt
gggagtgaaaagcattgcatttggcagtttaattttagggagttcaatgtgaatgaagat
atctttgctaatgattcaatagagatgttgagacaatgtgggattgattttgaaaagaat
acgcaaatgggtattgatgcgtgtcgatttggggagcttttgatgtcatccggtattgta
ttgaatccaaatatttgttgggtgacttttcatagtgggtatgattttgggtacttgctt
aagttattgactcgaaaagaactgcccaagactcaagaggggttctttaatttgatcaac
gtttactttccgatggtttatgatattaaacacttgatgagattttgcaatcatcttcat
gggggtttgaataaacttgcggagatcttggaagttaaaaggattggtgtttgtcatcaa
gctgggtctgatagtttgcttacgtctcatgcttttaagaaactcaaagaaagttatttt
gatggagctacagagaagtatgcaggtgttttatacggattaggagtggaatcggaagtg
caaaataagtag
DBGET
integrated database retrieval system
