Erigeron canadensis (horseweed): 122581984
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Entry
122581984 CDS
T07610
Name
(RefSeq) ABC transporter F family member 1-like isoform X1
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ecad03009
]
122581984
Ribosome biogenesis [BR:
ecad03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
122581984
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_15
AAA_23
MMR_HSR1
AAA_14
AAA_24
AAA_22
RsgA_GTPase
AAA_28
AAA_16
AAA_30
Ig_F54D1_6_2
RecG_N
Motif
Other DBs
NCBI-GeneID:
122581984
NCBI-ProteinID:
XP_043610253
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All DBs
Position
9:complement(31050839..31057225)
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AA seq
595 aa
AA seq
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MVSDASKKKAAQKKAAAAAKRGAKAVAAAASKKAAAIGSENLTDGIGSLTVSDRTCTGVL
CSHPLSRDIRIESLSLTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGLRELP
IPAHMDIFHLTREIEASDMSSLEAVMNCDEERLKLEEEAERLIGQDDGGGEALERVYERL
EAMDASTAEKRAAEILNGLGFNKNMQEKKTRDFSGGWRMRIALARALFMNPTILLLDEPT
NHLDLEACVWLEETLKKFERILVVVSHSQDFLNGVCTNIIHMQNKKLKLYTGNFDQYVQT
RSELEENQMKQYKWEQDQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVT
RDKVLVFRFTDVGKLPPPVLQFVEVSFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKS
TLLKLMTGELVPLDGMVRRHNHLRIAQFHQHLAEKLDLEMSALTYMMTEYPGNEEEKMRA
AIGRFGLTGKAQVMPMKNLSDGQRSRVIFSWLAYRQPHMLLLDEPTNHLDIETIDSLADA
LNDWDGGLVLVSHDFRLINQVAQEIWVCENQAVTRWQGDIMAFKEHLRSKAGLSD
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggtttctgatgcaagtaagaagaaagcagcacaaaagaaagctgcagctgctgctaag
cgaggcgctaaggcagtcgcagctgctgcttcgaagaaagccgcagcgatcggttccgaa
aacctgaccgacggaatcggttcgcttacggtttctgatcgtacgtgtactggtgttctc
tgctctcatcctttatctagagatattagaatagagtctctatcacttactttccatgga
cacgatcttattgttgattcagagctggagctcaactatgggagacgatatggattgctt
ggattaaatggctgcggtaaatctacacttcttactgcaattggactgcgagagcttccc
attccagcgcacatggatatattccatcttacgagagagattgaagcttctgatatgtcc
tcacttgaggctgtgatgaattgcgatgaagagaggctgaaattggaggaagaagctgaa
cgattgattggacaggatgatggtggtggagaagctttggaacgagtttatgaacgtttg
gaggccatggatgcatctactgctgagaagcgtgctgcggagattcttaatggtcttggt
ttcaacaagaatatgcaagaaaagaaaacacgcgacttttctggtggttggagaatgcgg
attgctttggcccgtgctctgtttatgaatcccacaatcttgttgcttgatgaacccaca
aatcatctcgatttagaagcttgtgtctggttggaggagaccctaaagaagtttgaacgc
atactggtggtggtctcgcactctcaagactttttaaatggcgtgtgcaccaacataatc
catatgcaaaataagaaattgaagttgtacactgggaatttcgaccaatatgttcagacg
cggtctgaactagaagagaaccagatgaaacagtataagtgggagcaggatcagattgct
tcaatgaaagagtacattgctcggtttggacatgggtcggctaagctggcccgacaggcg
cagagcaaggaaaagaccctggccaaaatggaacgtggtggtcttacagaaaaggtcact
cgggataaagttcttgttttccggtttactgatgtgggtaagcttcctccaccagtgcta
cagtttgtggaagtttcttttggttacacacctgataacctcatttataagaatcttgac
tttggagttgatcttgattcacgggttgcattggtgggacccaatggagctggtaagagc
acattgttaaaactgatgactggggagttggttccacttgatggcatggtaagacggcac
aatcacttgaggatagctcaatttcaccaacacttggcggaaaagctcgacttagaaatg
tcggctttgacttatatgatgaccgagtatcctggaaacgaggaagagaagatgcgggca
gccattgggcggtttggtctgacagggaaagcacaagtgatgcctatgaagaacctttca
gacggtcaaaggagccgagtgatcttttcgtggttagcatataggcaaccacatatgtta
cttttggatgaacctactaaccatctggatatagaaacaattgactcgctagctgacgcg
ttgaatgattgggatggtggtttggtgcttgttagccatgacttcaggctcattaaccag
gtggctcaggagatttgggtgtgtgagaaccaagccgtgactcgttggcaaggtgatatt
atggcttttaaggagcacttgaggagcaaggctggtctgtctgactaa
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