Erigeron canadensis (horseweed): 122582006
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Entry
122582006 CDS
T07610
Name
(RefSeq) proline--tRNA ligase, cytoplasmic-like isoform X1
KO
K01881
prolyl-tRNA synthetase [EC:
6.1.1.15
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122582006
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ecad01007
]
122582006
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecad03016
]
122582006
Enzymes [BR:
ecad01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
122582006
Amino acid related enzymes [BR:
ecad01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
122582006
Transfer RNA biogenesis [BR:
ecad03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
122582006
Prokaryotic type
122582006
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Motif
Pfam:
ProRS-C_1
HGTP_anticodon
tRNA-synt_2b
IMS
Motif
Other DBs
NCBI-GeneID:
122582006
NCBI-ProteinID:
XP_043610277
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Position
9:2749881..2754050
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AA seq
514 aa
AA seq
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MDGGKEDNNANNTSNVVPKSSKGRKKETGLGLTHTKDGNFGEWYSEVVTKGEMIEYSDIS
GCYTLRPTSTHIWRILQKFFEPEIEKMEVEECYFELFVSNKSLQKEKDHIQGFAPEVAWV
TRSGDSDLENPIAIRPTSETIIYPKFSKWIRGHRDLPKKVYQYCNVVRWELSNPTPFIRC
REFLWQEGHTAHATKEEADIEVLQILELYRRLYEEYLAVPVIKGKKSELEKFAGGLYTTT
VEAFIPNTGRSVQGATSHCLGQNFAKMFEVKFEDEKGEKALAWQNSWGYSIRMIGVMVMV
HSDDKGLVMPPKVSAVQVIVINVPHNDSDVNRKIENACLETVEALCAMGIRVKQDPRDNY
TPGWKYAHWEMKGVPLRIEIGSRDLENKQVRTVRRDNGAKVNVPMAGLADTVKVMLDDIQ
QSMFLVAKDKRDACVQVIKTWDEFIEALGQKKLILAPWCDEEEVEKHVKAKTKEESGACK
TLCSPIDQPEMPEGTLCFASGKPAKKWTYWGRSY
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggatggtggaaaagaagataacaatgccaacaacacatctaatgttgttcccaaatcc
agcaagggaaggaagaaggagactggtctaggccttacccatactaaagatggcaacttt
ggggaatggtattctgaggttgttacaaaaggtgaaatgattgaatattctgatatatct
ggctgttatactctccggccaacgtcaacgcacatttggaggatattgcaaaaatttttt
gagccagaaatagagaagatggaggttgaagaatgctactttgaactttttgtgtctaat
aaatctctacaaaaggaaaaggatcacatacagggttttgctcctgaggttgcttgggtc
acaagatccggtgactccgatttggaaaatcccattgctattcgcccaacaagcgaaact
atcatatatccaaaattctctaagtggatcaggggacatcgtgacctgcccaaaaaagtt
tatcaatattgtaatgttgttcgatgggagttgagtaaccctactccatttatcagatgt
cgtgagtttctttggcaagaagggcacacggctcatgcaacgaaagaggaggcagacatt
gaggttctacaaattctggaattatacaggcgcctatatgaggagtacttggccgtacct
gttatcaaaggcaaaaaaagcgaactagagaagtttgcaggtggtctttatacaactact
gttgaggcgtttattccaaatacaggacgtagcgtacaaggtgcaacgtcccattgcttg
ggccagaattttgctaagatgtttgaggtgaagttcgaggatgaaaaaggtgaaaaagct
ttggcctggcagaactcatggggatacagtattaggatgattggggtaatggttatggtg
cacagtgatgataaaggcctggtcatgcctcctaaagtttcagcagttcaagttattgtg
attaatgtgccccacaacgattcagatgttaatagaaaaatagaaaatgcatgcttggag
acggtagaagctttatgtgccatgggtatacgtgtgaaacaagaccccagagataactat
acacctggatggaagtatgctcactgggaaatgaaaggtgttcctttgagaatcgaaata
ggttcaagggacctggaaaataagcaggtacgcactgttcgtcgtgacaacggcgcaaag
gtcaatgttcccatggccgggcttgctgatacagtaaaagtgatgttggatgacattcaa
caaagcatgtttttagttgctaaagacaaacgggatgcgtgtgtccaagttataaaaaca
tgggatgaattcattgaagcattgggccaaaagaagttgatcttggctccatggtgtgac
gaagaggaagttgagaaacatgtaaaagctaaaactaaagaggagtcaggagcctgtaag
acgctttgctctccaattgatcagcctgaaatgcctgaaggcacattatgctttgcatca
gggaaacctgcaaagaaatggacttattggggacggagttattaa
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