Erigeron canadensis (horseweed): 122582036
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Entry
122582036 CDS
T07610
Name
(RefSeq) twinkle homolog protein, chloroplastic/mitochondrial
KO
K17680
twinkle mtDNA helicase [EC:
5.6.2.3
]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ecad03029
]
122582036
Enzymes [BR:
ecad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
122582036
Mitochondrial biogenesis [BR:
ecad03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
122582036
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Toprim_4
DnaB_C
Toprim
Toprim_2
AAA_25
Toprim_3
AAA_29
Motif
Other DBs
NCBI-GeneID:
122582036
NCBI-ProteinID:
XP_043610315
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Position
9:complement(16294482..16304883)
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AA seq
720 aa
AA seq
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MLHRHHYRGIPFHLNTIYYYYNTSSSSILMMMCSKSPSPSSSLLNHPPPPPATANNKYNN
KIKFKSYNGFIIKPSNPHLSLLKPPPFFSISNNNVTSFSTYANIPSPVSEAYLEKSDDEI
VDTPQPQLERLKVKLEEVGIRCKSYKTGQINGLLCPMCKGGDTGEKKLSLFIAEDCNAAM
WNCFRAKCGWRGSTRGTADVRSSYNKMNKLPSMKKARNITESELNLEPLCNDLCEYFAER
MISEETLRRNSVMQRRYDDQIVIAFTYRRKGELVSCKYRDLAKKFWQESDTEKVLYGLDD
IEGTSDVIIVEGEMDKLAMEEAGFRNCVSVPDGAPPTVSSKDVPSVEQDKKYQYLWNCKD
YLEKASRIILATDADEPGQALAEEIARRLGRERCWRVTWPSKNDNEQFKDANEVLMFMGP
AVLREAVESAELYPIKGLFCFRDYFSEIDAYYHQTLGAEIGVSTGWRAMDDLYNVVPGEL
TIVTGVPNSGKSEWIDALLCNLNKSVGWKFALCSMENKVREHARKLLEKHVKKPFFNVRY
GKSIERMSVEELEEGKQWLNDTFHLIRCENDCLPSTNWVLSLAKAAVLRHGVNGLVIDPY
NELDHQRPPNQTETEYVSQMLTSIKRFAQHHSCHVWFVAHPKQLQQWTGKPPNLYDISGS
AHFINKCDNGIVVHRNRDPDEGAMDQVQICVRKVRNKVSGTIGDAYLSYNRITGEYMDIK
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaccggcatcattatcgaggaatcccttttcacttgaacacaatctactactac
tacaacactagtagcagttccatattaatgatgatgtgttccaaatcaccctcaccctct
tcttccttattgaaccaccctcctcctcctcctgctactgctaataataaatataataat
aaaatcaaatttaagagttataatggttttattattaaaccctcaaatcctcatttatct
cttcttaaacccccgcccttcttctctattagtaataataacgtcacttctttttctact
tatgccaatattccaagtccagtttctgaagcatatttggagaagtctgatgatgaaata
gttgatacgccacagccacagctagagcggcttaaagtgaaactggaggaggttggaata
cgctgtaaatcttataagactggacagataaatggcttactttgccctatgtgcaaaggc
ggcgacactggggagaagaaactctctctcttcattgctgaggattgtaatgcagcgatg
tggaattgttttcgagccaagtgtggatggagaggcagtacacggggtactgcagatgtt
aggtcaagttacaacaagatgaataaacttcccagcatgaaaaaagctaggaatattaca
gagagtgaattgaatttggaacctttgtgcaacgatttatgtgaatattttgccgagaga
atgatatctgaagagacgttacggcggaactctgtcatgcaaagacgatatgacgatcag
attgtcattgcatttacttatagacgaaagggggaacttgttagctgcaagtaccgggat
cttgcaaagaaattctggcaggaaagtgatactgaaaaagtattatatggactcgatgat
atagaaggaacaagtgatgtcatcattgttgagggtgaaatggacaaacttgcaatggaa
gaagcaggcttcaggaactgtgtgagtgtccctgatggtgctcctccaactgtttcgtct
aaagatgtaccatctgtagaacaggacaaaaaataccaatatttgtggaactgtaaggat
tatttagaaaaggcatctcgcataatacttgccactgacgcggatgagccaggccaagct
ttagccgaagagatcgcacgccgcctcggaagagaaaggtgctggcgagtcacgtggcct
agcaaaaacgataatgagcagttcaaagatgctaatgaggttctgatgtttatggggcca
gctgtattaagagaagctgttgagtctgctgaattgtacccaattaaaggtttattttgt
tttagagattacttcagtgaaatagatgcgtattaccatcaaacccttggtgctgagatt
ggagtttcaactggatggagggcgatggacgatttatataatgttgtgccaggagagttg
actatagtcactggtgttccaaattcagggaagagcgagtggattgatgctttattatgc
aatcttaataaaagtgttggttggaagttcgcgctttgttctatggagaataaggtgaga
gagcatgcaaggaaacttctagagaaacacgtgaagaagccattcttcaatgtgaggtat
ggaaaatctatcgaaagaatgagcgtggaggaattggaggaaggaaagcaatggttgaat
gataccttccatctcatacggtgtgagaatgattgccttccaagtaccaattgggtcctt
agtcttgcgaaagctgctgttcttagacatggggtgaatgggcttgtgattgatccatat
aatgagcttgaccaccagcgtccccccaaccagactgagacagaatatgtaagtcagatg
ctaactagcatcaagcgttttgcccaacaccattcatgccatgtttggtttgtggctcat
cctaagcagttgcagcagtggactggaaaacctccaaacctatatgatataagtggaagt
gcacattttataaacaaatgcgataacggaatagttgttcatcgaaatagggatccagat
gaaggtgcaatggatcaagtacagatttgtgtacgaaaggttcggaataaagtctcagga
acaataggtgatgcatacctgagttataatagaataaccggtgaatatatggatatcaag
tag
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integrated database retrieval system
