KEGG   Erigeron canadensis (horseweed): 122582039
Entry
122582039         CDS       T07610                                 
Name
(RefSeq) splicing factor U2af small subunit B-like
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122582039
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ecad03041]
    122582039
Spliceosome [BR:ecad03041]
 Complex A
  U2 snRNP components
   U2 related factors
    122582039
 Complex B
    122582039
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus zf-CCCH_4
Other DBs
NCBI-GeneID: 122582039
NCBI-ProteinID: XP_043610318
LinkDB
Position
9:34813858..34817839
AA seq 328 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDSITP
GVDPQGQPLDPTKIQNHFEDFYEDLFEELGKYGEIESLNICDNLADHMVGNVYAQFREEE
HAAAALQNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKINKDL
RRQLFGRRRRSRSRSRSPPRHRNHDDRPYPGGRGGSGRRGGSGYPDHRQSDRSRRPRSRS
PPRRSGRSRSPGGKRNRSPVREGSAERRAKIEQWNREKEQAKSAPETATGNDYNGNDNNN
DVTALHDGDRAHHHDQQKPQQDEAGYDY
NT seq 987 nt   +upstreamnt  +downstreamnt
atggcggagcatctggcatcaatatttgggacggaaaaagacagagtaaactgtccgttt
tatttcaagatcggagcttgcagacatggcgatcgctgttcacgccttcacaccaaacct
tccatttccccaactcttttattatccaacatgtatcaacgccctgattccatcactcca
ggcgttgaccctcaaggtcaaccccttgatcccaccaaaatccaaaatcactttgaggac
ttttatgaagatctgtttgaagagcttggaaaatatggagagatcgaaagtctcaacatt
tgtgataatttggctgaccatatggtgggaaatgtgtacgcacagtttagggaagaagag
catgctgcagctgctctccagaatctgagcggaaggttctatgcaggtcgtcctattatt
gtggacttctctccagtgacagattttcgtgaggctacatgtaggcagtatgaagaaaac
gtttgtaatcgaggtggttactgcaacttcatgcatctaaagaagatcaacaaagatctg
aggaggcagctgttcgggagacgtaggagaagcaggagcagaagccgtagtcctccaagg
caccggaatcatgatgatcgtccatatcctggtgggcgtggtggttcagggagaagagga
ggcagtggttaccctgatcaccgtcagagcgacagaagcaggcggcccagaagtaggagt
cctccacggagatcaggacgtagtagaagcccaggaggaaagcgaaaccgtagtccagtc
agagaaggaagtgctgagagaagggcaaagattgaacagtggaatagagaaaaagaacaa
gcaaaatcagctcctgaaaccgccactggtaatgactataatggtaatgataacaataat
gatgtcactgctttgcatgatggagaccgagcccatcaccatgatcagcagaagccacaa
caagatgaagcgggatacgattactga

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