Erigeron canadensis (horseweed): 122582106
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Entry
122582106 CDS
T07610
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122582106
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122582106
Enzymes [BR:
ecad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122582106
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
122582106
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Beta-prop_NOL10_N
YpzI
Motif
Other DBs
NCBI-GeneID:
122582106
NCBI-ProteinID:
XP_043610398
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All DBs
Position
9:2287529..2292317
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AA seq
305 aa
AA seq
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MAPGGGVCKDVIESHPKPLKYDVAITKTDKSVTRIATGASAKHGMQSTNGVHELLECPVC
TTLMYPPIHQCPNGHTLCSNCKLRVHNCCPTCRLEMGNIRCLALEKVAESLELPCRHQSL
GCHDIFPYYSKLKHEQNCRFRPYNCPYAGSECSITGDIPYLVAHLKDDHNVDMHDGCSFN
HRYVKSNPHEVENATWMLTVFNCYGRQFCLHFEAFQLGMAPVYISFLRFMGEDSEAKKFS
YSLEVGGFGRKFTWQGVPRSIRDSHRKVRDSQDGLVIPRNLALFFSGGDRQELKLRVSGR
IWKEQ
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggctccaggtggtggtgtttgtaaagatgttattgagtctcatcctaaacctttgaag
tatgatgtagcaatcacaaagactgataaaagtgttacaaggatagcaactggagcaagt
gcaaaacatggaatgcaatcaacaaatggtgttcatgagcttcttgaatgtccagtgtgc
accactttaatgtatcctcctattcaccagtgtccaaatggtcacacgttgtgctcaaac
tgcaaacttcgagtgcacaattgctgtcccacgtgccgtcttgaaatgggtaacataagg
tgtttggcgttagagaaagtagcagaatctttggaacttccatgtcgacaccaaagtctt
ggttgtcatgatatctttccttactatagcaagctgaaacacgagcaaaattgccggttt
cgcccttacaactgtccttatgctgggtctgaatgttcaatcaccggtgatatcccgtat
cttgtggcacatttaaaggatgatcataacgtggatatgcatgatggatgcagtttcaac
catcgatatgttaaatctaatccacatgaagttgaaaatgcaacatggatgttaactgta
tttaattgctatggaagacagttctgtttgcactttgaagcattccagcttggaatggca
ccagtttacatatcgtttctaaggttcatgggtgaggacagtgaagctaagaagttcagt
tactcgttagaagtgggagggttcggacgcaagttcacctggcaaggagttccaaggagc
atacgcgatagtcaccgtaaagttcgtgatagtcaagatggtttagtcataccgagaaac
ttagctctctttttctctggtggagataggcaagaactcaagttaagagttagtggtcgt
atatggaaagaacagtga
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