Erigeron canadensis (horseweed): 122582171 Help Entry 122582171         CDS       T07610                                  Name (RefSeq) pre-mRNA-splicing factor SYF1   KO K12867   pre-mRNA-splicing factor SYF1 Organism ecad  Erigeron canadensis (horseweed) Pathway ecad03040   Spliceosome Brite KEGG Orthology (KO) [BR:ecad00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     122582171  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ecad03019]     122582171    03041 Spliceosome [BR:ecad03041]     122582171 Messenger RNA biogenesis [BR:ecad03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Other transport factors      122582171 Spliceosome [BR:ecad03041]  Complex B   Other components    Prp19-related factors     122582171  Complex C     122582171 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_PRP39_C TPR_14 Suf TPR_15 ARM_TT21_C ARM_TT21 NRDE-2 Motif Other DBs NCBI-GeneID:  122582171 NCBI-ProteinID:  XP_043610464 LinkDB All DBs Position 9:complement(23500858..23508095) Genome browser AA seq 904 aa AA seqDB search MSTIPSDLYPSQDDLLYEEELLRNPFSLKLWWRYLIARTDAPFKKRSVIYERALKALPGS YKLWHAYLRERLELVRNLPVSYPQYQALNNTFERALVTMHKMPRIWIMYLTSLTEQKLVT RTRKAFDRALCALPVTQHDRIWEKYLVFVSQKGVPIETALRVYRRYLKYDPGHIEDLIEF LLNSELWQEAAERLAGVLNDDRFYSIKGKTKHRLWLELCDLLTQHASEISGLNVDAIIRG GIRKFSDEVGRLWTSLADYYIRRKLLEKARDVFEEGMTTVVTVRDFSVIFDAYSQFEESV LALKMEGLSESEDEEENGVEDDDGDEEEEDRLNVGKLEEKLKKFWLSDDKDVDLRIARLE HLMDRRPELANSVLLRQNPHNVEQWHRRVKIFEGNPTKQILTYTEAVRTIDPMKAVGKPH TLWVAFAKLYETHKDIANARVIFDKAVQVNYKAVDNLASVWCEWAEMELRHKNFKGALEL MRRATAEPSAEVKRRVAADGNEPVQIKLHKSLRLWTFYVDLEESLGTLESTRTVYERILD LRIATPQIIINYAMLLEDNKYFEDAFKVYERGVKIFKYPHVKDIWVTYLSKFVKRYGKSK LERSRELFEHAVEMAPSEVVKPLYLQYAKLEEDYGLAKRAMRVYDQAAKAVPANEKLSMY EIYIARAAEIFGVPKTREIYEQAIVSDGLPEKDAMKMCIKYAELEKSLGEIDRARKIYVY ASWLADPRSDGDFWKKWHDFEVQHGNEDTFRDMLRIKRSVSTRHSQTHVMLPEFLMQKST VDAGTPEDGMAALERQLAPADPENLPSNDTTARKLGFVSAGVQVSQKESGILQNQEEIDL PEGSDSDEEDGDGKVEIAQKDVPDAVFGGLIRKRDEEAEKEKENGDGETRLGALERMKRR RQGN NT seq 2715 nt NT seq  +upstreamnt  +downstreamnt atgtcaacaattccttccgatttatatccgtcacaagatgaccttctgtacgaagaagaa cttctccgaaatccattcagtctaaaactatggtggcgatatttaatcgcccgaaccgac gcgccgttcaaaaaacggtccgttatttacgaacgagcactaaaagcattaccaggaagc tacaaactctggcacgcgtatctccgagaacgactcgaattggtacgtaatttacccgtt tcgtatccgcaatatcaggctttaaataatacatttgaacgtgccttagttactatgcat aaaatgcctagaatttggattatgtatttgactagtttgactgaacaaaagctagttact aggacacgtaaagcgtttgatagggcgttatgcgcgttgcccgttacgcaacacgatagg atttgggagaagtatttggtttttgttagtcagaaaggggttccgattgagacggcgtta agggtttatagacggtatttgaagtatgatccgggtcatattgaggatttgattgagttt ttgttgaattcggagttgtggcaagaggctgcggagaggttggcgggtgttttgaatgac gataggttttattcgattaaagggaagacgaaacataggttgtggttggagctttgtgat ttgcttacgcaacatgcgagtgagatttcggggttgaatgttgatgcgattattagaggc gggattaggaagtttagtgatgaggtgggtcggctttggacttcgttggcggattattat attaggaggaagttgttggagaaggcgagagatgtatttgaagaagggatgacgacggtt gttactgttagggattttagtgtgatttttgacgcgtattcgcagtttgaggagagtgtg cttgctttgaagatggaagggttgagtgagagcgaggatgaagaggaaaacggtgttgaa gatgatgatggagatgaggaagaagaggatcggctaaatgtgggaaagttggaggagaag cttaagaaattttggttgtcagacgataaagatgttgatttgaggatagcgagattagag catcttatggatagaaggcccgaactcgctaatagtgttcttcttcgtcaaaatcctcat aatgttgaacagtggcataggagagttaagatctttgaagggaatccaacaaagcagatc ttaacatatacagaagcagtacgaacaattgacccaatgaaagcggttggcaaacctcat accttgtgggttgcgtttgctaaattgtatgaaactcataaggacattgctaatgcaagg gtgatttttgataaggctgtgcaagttaactataaagctgtggataatcttgctagtgtt tggtgtgaatgggcagaaatggagctcagacacaaaaatttcaagggagcattggaacta atgaggcgtgctacagctgaaccatccgctgaagtgaaacgcagagtggctgctgatggc aatgaaccagtacaaataaagttgcacaaatcgctaaggctttggactttttatgtggat ttagaagagagtctgggcaccttggaatccacccgtactgtatatgagaggatcttggat ctacgaattgctacaccgcagattattataaactatgcaatgctgctagaggataacaag tactttgaagatgcttttaaggtctatgaaagaggggtgaagatcttcaaatatcctcat gtgaaggacatttgggttacttatctctcgaagtttgtgaaaagatacgggaagtccaaa cttgaaaggtccagagagctgtttgagcatgctgttgaaatggctccttctgaagttgtg aagcccttgtatcttcaatatgctaagttggaggaggattatggtctagctaaacgagca atgagagtttatgatcaagcagcaaaagctgtcccagctaatgagaagttgagcatgtat gaaatttacatagcacgtgcagctgaaatttttggagtccctaaaactagggagatttat gaacaggcaattgtttctgatgggcttcccgagaaggatgccatgaagatgtgcatcaag tatgcagagcttgagaagagtcttggagaaattgatcgtgcccgtaaaatatatgtttat gcatcttggcttgcggatccacgctctgatggtgatttttggaagaagtggcatgatttt gaagtacaacatggtaacgaggatactttccgcgacatgcttcgtattaagaggagtgtt tctactagacatagccagacacatgtgatgctcccggagtttttaatgcagaagtcaact gtagatgccggtacccctgaagatggaatggctgctttagaaaggcagttggctcctgct gacccggaaaaccttccttccaatgatactactgctagaaagcttggatttgtaagtgct ggtgtacaggtatcgcaaaaagaatcaggaatactacaaaaccaagaagagatcgatctt ccggaagggagcgatagtgacgaagaagatggtgatggaaaagttgagattgcacagaaa gatgtacctgatgctgtgtttggtgggcttatcagaaaaagagatgaagaagcagaaaaa gaaaaagaaaatggagatggtgagacccgtcttggtgcacttgaaagaatgaaaaggagg cgtcaaggtaactaa

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