Erigeron canadensis (horseweed): 122582182
Help
Entry
122582182 CDS
T07610
Name
(RefSeq) LOW QUALITY PROTEIN: aspartic proteinase A1-like
KO
K08245
phytepsin [EC:
3.4.23.40
]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ecad01002
]
122582182
Enzymes [BR:
ecad01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.23 Aspartic endopeptidases
3.4.23.40 phytepsin
122582182
Peptidases and inhibitors [BR:
ecad01002
]
Aspartic peptidases
Family A1: pepsin family
122582182
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Asp
TAXi_N
TAXi_C
Motif
Other DBs
NCBI-GeneID:
122582182
NCBI-ProteinID:
XP_043610476
LinkDB
All DBs
Position
9:11695546..11698321
Genome browser
AA seq
418 aa
AA seq
DB search
MGHHHKAITAFLIISSSLLYPSLILSDSADGGHIKVKLKRLKSTHASRVALPSVLGLTRD
ENDPNEPNIVLLKNYMDTQYYGEIGIGTPPQTFTVIFDTGSSNLWVPSSKCYISMSCYVH
SKYSSRRSMTYKRSGKSAAIEYGSGSIFGFFSNDDVRVGDLVIKNQEFIEATLEPGMTFM
SGKFDGILGLGFIGISVGNATPVWDNMMKQGLVKDPLFSIWLNRGTDNQEYGGEIVFGGV
DPNHYEGDHTFVPVTQKGYWKFNFDDVLIDGKSSGLCQNGCSAIADSGTSLITGPMTAIT
KINNAIGARSFATPQSNRXNLFCDXSLGEMKESGVDCANVSTMPNISFVIGGKDFVLLPQ
EYLVKDGNGDRPTCISGFMPLDVASPQDPLWILGDVFMGRYHTIFDYGNLRVGFAKAA
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgggacatcatcacaaagcaattacagctttccttatcatttcttcgtcacttttgtat
ccttccttgatcctttctgattcggctgatggcgggcacattaaagttaaactgaagcgt
ctcaaatcaacccatgctagtcgtgttgctctgccttcggtattgggtctgactcgcgat
gaaaatgatcctaacgagccaaatatcgtgcttttaaagaactatatggacactcaatac
tatggtgagatcggcattggtaccccgcctcaaacatttactgtaatctttgataccgga
agttccaatctatgggtgccatcatcaaagtgttatatctcgatgtcttgctatgttcat
tcaaagtatagctcaagaaggtcaatgacatacaagagaagcgggaaatctgctgcaatt
gagtatggtagcggatcgatatttggattctttagtaatgacgatgtcagagttggggat
ttggttattaagaaccaggagttcattgaggcaacactggaacctggtatgacattcatg
tccggaaaatttgatggtatacttggacttggattcattggaatttctgttggaaatgct
accccagtatgggacaatatgatgaagcaaggtctagttaaagatccattgttctcaatt
tggttgaaccgtggtactgacaaccaagaatatggaggcgaaatcgtttttggtggtgtc
gatccaaaccattatgagggtgatcatacttttgttcccgtcactcaaaagggctattgg
aagttcaattttgacgacgttcttatagatggaaaatcaagcggactttgtcaaaatggg
tgttctgccattgcagattcaggaacttctttaatcacaggtccaatgactgcgatcacc
aagataaataatgccattggagctaggagcttcgcaactccacaatccaatcgataaaac
ttattctgtgattgatctcttggtgaaatgaaggaatcaggtgttgattgtgctaacgtt
tcgaccatgcctaatatttcatttgtaatcgggggcaaagattttgttcttttaccacaa
gagtaccttgttaaagatggcaacggcgatcgccctacttgtattagcggtttcatgccg
ttggatgttgcttctcctcaagaccctctatggatattgggagatgtttttatgggtcgt
taccatacaatattcgactatgggaatttgagagttggatttgctaaggcagcatag
DBGET
integrated database retrieval system
