Erigeron canadensis (horseweed): 122582404
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Entry
122582404 CDS
T07610
Name
(RefSeq) transcription factor-like protein DPB isoform X1
KO
K04683
transcription factor Dp-1
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
122582404
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecad03000
]
122582404
03036 Chromosome and associated proteins [BR:
ecad03036
]
122582404
Transcription factors [BR:
ecad03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
122582404
Chromosome and associated proteins [BR:
ecad03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
122582404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DP
E2F_TDP
YcbB
Motif
Other DBs
NCBI-GeneID:
122582404
NCBI-ProteinID:
XP_043610728
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All DBs
Position
9:34138758..34142745
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AA seq
353 aa
AA seq
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MVISNNQDKISGDKKKPVNSKGGGGGSWGTNGSGQSVSTSGSVGSPLTRSDSAGGGGGVV
TPVPENKILRLNTLDSVGSQEVVGDKKKKQRQRATGPDKGNRGLRQFSMKVCEKVESKGR
TTYNEVADELVAEYTDTSNAGETADQQPYDEKNIRRRVYDALNVIMAMDIISKDKKEIQW
KGFPRTSLDDIQEIKRERLAIRSRMEKKAAYLKELQDQYEGLQNLVHRNERLYSSGNAPN
GGVSLPFILVQTQPHATVEVEISEDMQLVHFDFNSTPFELHDDNYVLKAMKLSGQPEFDD
MTIDVSDQPKEEVIANDTSPMFWTPSKPTVQSGKPSSSPPVPGILKPRAKHGH
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggtgatatcaaacaatcaagacaaaattagtggggataagaaaaaaccagttaattcc
aaagggggtggtggtgggtcatggggcacaaacgggtcgggtcaatccgtttcgacaagt
ggcagtgtcgggtcacctttgacccggagtgattcagcaggaggaggaggaggagttgtg
acacctgttcctgagaataaaattttgaggttgaatactcttgatagtgttggatctcaa
gaagttgttggtgataaaaagaagaagcaaagacaacgcgcaactggaccggataaagga
aatagaggacttcggcagtttagtatgaaagtgtgcgagaaggttgaaagcaagggaaga
accacttataatgaggttgcagatgaacttgtagccgaatatacagatactagcaacgct
ggcgaaactgctgatcagcagccatatgatgaaaagaatattcggcgaagggtatatgat
gcattgaatgtcatcatggcaatggatattatatctaaagataaaaaagaaatacagtgg
aagggttttccaagaactagcttggatgatatccaagagataaagagggaacgtcttgct
ataaggagcagaatggagaagaaagctgcatatctcaaagaactgcaggatcaatatgaa
ggccttcagaatctggtacatcggaatgaacggttatacagttctggaaatgctccaaat
ggtggagtgtctttgccttttatacttgtccagactcaacctcacgctaccgtggaagtg
gaaatttcagaagatatgcaactggttcatttcgacttcaatagtactccatttgagcta
cacgatgacaactacgttctcaaggcaatgaagctatctggccaaccagaatttgatgac
atgacaatcgacgtttctgaccagccaaaagaagaagtcatagcaaacgacacatctcca
atgttttggactccttcaaagcccaccgtgcaatccggcaagccgtcaagctcgccaccg
gttcctggaattcttaaacctcgtgccaagcatggccattag
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