Erigeron canadensis (horseweed): 122582661
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Entry
122582661 CDS
T07610
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00040
Pentose and glucuronate interconversions
ecad01100
Metabolic pathways
Module
ecad_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122582661
Enzymes [BR:
ecad01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
122582661
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
122582661
NCBI-ProteinID:
XP_043611020
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Position
9:complement(22922638..22927990)
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AA seq
415 aa
AA seq
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MHLHKHLVIFLTILGLSLSCSSFRNNQHLDKPTPTRLSPRDRPKLHYNVDDYGAMANGKD
DSKAFMEAWKNACKSSSNLAEFVVPKNKVYHLKPITFYGPCNPNLKVKVYGTIKASSHRS
DYNEDRRRWIMFEDLQNLVVEGGGTINGNGRIWWIKSCKVDETQPCKGAPTALSFKNCTN
LNVNNIRIKNPQQIHLTFQNSLNVRASNLRIIAPATSPNTDGIHITGSQNVRVLNSIVRT
GDDCVSIVDGSRNVIIKKITCGPGHGISIGSLGKNNSDDQVSNILVDNAIISNTTNGVRI
KSWQGGSGYARNIRFQNIVMHNVTNPIIVDQNYCDRKEECPEQYSAVQMQNVVYRNIQGT
SNSEVAINFDCSKTFPCQSVILDNVVLNRAGEGDMKALCSNVKLTTRGKVTPRCE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgcatctacataagcacttggtcatatttctaacaatcttggggttaagcctctcttgt
tcttcttttagaaacaaccaacacctcgacaaaccaacaccaacccgcttatcacctcgt
gatcgacccaaattgcattataatgtagacgactatggagccatggctaatgggaaggat
gattctaaggcatttatggaagcttggaagaatgcttgtaaatcatcaagtaatcttgcc
gaatttgtagttcctaagaacaaagtgtatcatcttaagcccatcactttttatggtcct
tgtaaccctaatctcaaagttaaggtttatgggacaatcaaagcttcttcacatcggtcg
gactacaacgaagatcgaagacgttggattatgtttgaagatctacaaaatttagttgtc
gaaggaggaggaaccatcaatggaaatggaaggatttggtggattaaatcttgcaaagtt
gatgaaactcaaccttgcaaaggtgcgcctacggcattaagtttcaagaattgcacgaat
ttaaacgtgaataatataaggattaaaaatccgcagcaaattcatttaacttttcaaaat
tcattaaatgtaagagcttctaatctaaggatcatcgcgcctgctactagtcccaacacc
gatggaattcatataacaggttctcaaaatgttcgagtcctcaactccattgtgagaaca
ggtgatgattgtgtttcaatcgtagacggatcaagaaatgtcataattaagaaaataaca
tgtggcccaggtcatggaattagtattggaagtttggggaagaacaattcagatgaccaa
gtgtcaaatatattagtggacaatgcaataatttcaaacaccacaaatggagttagaatt
aaaagttggcagggaggatctggttatgctagaaatatcagatttcaaaacattgtaatg
cacaatgtgactaatccaataatagtggatcaaaactattgtgatcgcaaagaagaatgc
ccagaacagtactcggctgtacaaatgcaaaatgtggtctataggaacatacaaggaaca
agtaattcagaagtagccataaatttcgattgtagcaagacgtttccttgccaatcggtt
atattggacaatgtagttctaaatcgagccggtgaaggagacatgaaagcgttatgttca
aatgtcaagttgacgactagaggaaaagttacaccccgttgcgaatga
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