Erigeron canadensis (horseweed): 122582785
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Entry
122582785 CDS
T07610
Name
(RefSeq) sister chromatid cohesion protein SCC4
KO
K11266
MAternally affected uncoordination
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecad03036
]
122582785
Chromosome and associated proteins [BR:
ecad03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
122582785
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cohesin_load
TPR_12
NRBF2_MIT
Motif
Other DBs
NCBI-GeneID:
122582785
NCBI-ProteinID:
XP_043611158
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Position
9:complement(4860363..4868803)
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AA seq
720 aa
AA seq
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MEGVAEGLWELAEMFERKGEIGKSIKCLEGICQSNVSFLPVVEVKTRLRIATLLLKHSNN
VNHAKSHLERSQLLLKSIPSCFELKCRAYSLLSQCYHLIGAVSSQKQLLNKGLELTATFG
EGFSGKLWSCNFNSQLANALIIEGDYQGSVSALEQGYVFASEMYYPELQMFFATSVLHVH
LMQWEDGSLVEGAVSRCNDVWESIDPDRKDQCLGLFFYNELLHIFYLLRICDYKNAGQHV
DKLDEAMKTDLEKIQQARELTKELNIVNEGLSQADLPYRDRATLSSRRIQLEGEISNFIG
PNSIGQEVLEPAYFGNVKRELGDKLELAPPPIDGEWLPKSAIYSLVDLMVVIFGRPKGLF
KECGKRIQCGLNTIQAELVKYGITDGTTEVDLQHSAIWMAGVYLMILMQFLENKVAMELT
RADFVEAQEILLEMRGWFNRFPTILQACESIIEMLRGQYAHCVACYDEAAFHFVEAAKLT
ESKSAQAICHVYAAVSYICIGDPDSYAKALELVGPIYRIIDSFVGVREKTTALFAYGFIL
MRQENLQEARVRLASGLQTTHTTLGNLQLVSQYLTVLGNLALALHDTSQAREILRSSLTL
AKKLYDIPTQIWVLSNLTALYEQVGEKENEMNNRDYEKKKADELQKRLTKAHASRHHREL
IEKTKFQVQRINEIDIKRAFAGPSVRVDLDIPESVGLSSSASRPSSRLMDVDLKRGTRKR
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggagggagtagcagaaggattgtgggaattagcagaaatgtttgaaaggaaaggagaa
atagggaaatcaatcaagtgtttggaaggaatatgtcaaagcaatgttagttttctccca
gttgttgaagtcaaaacgaggctcagaattgctactttgcttcttaaacattctaataat
gttaatcatgctaaatctcaccttgaacgctctcaactactcttgaagtcaatcccctcg
tgctttgagttaaagtgcagagcttatagcttactgagtcaatgttaccatcttattgga
gctgtctcttctcaaaagcagctattaaacaagggattggaacttactgcaacatttggg
gaagggttttctgggaaattatggtcatgcaacttcaattcccaacttgctaatgctctc
atcatagagggagattatcagggttcagtatctgctttggaacagggttatgtttttgca
agtgagatgtactatccagaattacagatgttttttgcaacttcagtactgcatgtacac
ctcatgcaatgggaggacggaagcttagttgaaggtgctgtaagtagatgcaatgatgtt
tgggagtctattgatccagacagaaaagaccaatgccttggtttattcttctacaacgag
ttgctccacatattttatcttctccgtatatgtgactacaagaatgctggtcaacacgtt
gataaattggacgaagctatgaagactgacttagaaaagattcaacaggcgcgggagctc
acaaaggaactcaatatagtcaatgaaggtctctcacaagctgatctaccctacagagat
agggctactctcagctctagacgaattcaacttgaaggagaaatcagtaattttattggc
ccaaactctattggtcaagaagtgctagaacctgcgtactttggtaatgtgaaacgagag
ttaggtgacaagcttgagttagcacctcctcccattgatggagagtggctacccaaaagt
gctatatattcactagttgatcttatggttgttatttttggtcgcccaaagggacttttc
aaggagtgtggaaagagaattcagtgtggactaaatactattcaagcggagctggtgaaa
tatggaattactgatggtaccacagaggtggatttgcaacactctgcaatttggatggct
ggcgtgtacttgatgatattaatgcagtttcttgagaataaagtagccatggaactaact
cgtgctgattttgttgaagcacaagagatattattggagatgaggggttggtttaaccgt
ttccccacaattttacaagcttgtgaaagcattattgagatgcttagagggcaatatgcc
cattgtgtcgcttgttatgatgaagctgcttttcattttgttgaggcagcaaagctgact
gagagcaaatctgcacaagccatctgtcacgtttatgcagctgtgtcttacatatgcatt
ggtgatccagattcctatgcaaaggctttggagttggttggaccaatttatagaataatc
gattcttttgttggagttcgagaaaaaactactgctctttttgcatatggatttatttta
atgaggcaggagaatctacaagaagcacgggttcgattggcaagtgggttgcagacaact
catacaactcttggcaatcttcaactagtgtcgcagtatctaacggtgcttggcaatctg
gcactagctcttcatgatacgagtcaagcccgagaaattttgaggtcttcccttacgtta
gcaaagaagctttatgatattcccactcagatttgggtcttatcaaacctgactgcatta
tatgagcaagtaggtgaaaaggagaatgaaatgaataatcgtgattatgaaaagaaaaag
gcagatgagctgcaaaaaagactcactaaggcacatgcatcccgtcatcaccgtgaactt
attgagaagacaaaattccaagttcaaagaataaatgaaattgatatcaagcgagcattt
gctgggccatccgtgagagtggatctcgacatacctgaatccgttggattgtcatcatcc
gcttccagaccttcatcaaggctcatggatgtagatctcaaacgtgggacccgcaaacga
tag
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