Erigeron canadensis (horseweed): 122582809
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Entry
122582809 CDS
T07610
Name
(RefSeq) uncharacterized protein LOC122582809
KO
K22817
non-structural maintenance of chromosomes element 1 [EC:
2.3.2.27
]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122582809
03400 DNA repair and recombination proteins [BR:
ecad03400
]
122582809
Enzymes [BR:
ecad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122582809
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
Atypical E3
122582809
DNA repair and recombination proteins [BR:
ecad03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
122582809
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_Nse1
zf-RING-like
SLX1_C
zf-HC5HC2H
PHD
Motif
Other DBs
NCBI-GeneID:
122582809
NCBI-ProteinID:
XP_043611179
LinkDB
All DBs
Position
9:complement(30032333..30036455)
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AA seq
356 aa
AA seq
DB search
MAPLCWRHHTLIQALLSRGPLKDQDFHSIFSDVTGKSFDSNQKLFNDYLRKINMELSYVQ
LELRACRNQYDGCVYYGVINTVADEQSKLGTKYSVPQIAFYKAIIEAIVQDATAQGTMCN
IEALNIRLENQGASSSQAPPAFKNFSMSQKEKTIKELVQDQWLCDTPDARIGLGVRSFLD
LRSWFHSNEVPPCDVCNEAGIKADMCRNESCTVRIHKYCLKAKFSQARTEKVCPGCGTQW
PYVAAKAEAVEEDDTDDHQPPPESLRRKRPRGSRQVPEDESNGPSQVQPSSGPSRRRLRR
LGNDEDEELIGPSQGQPSTQTLRRAKVEKFTDAEVDNAGAGPSTRRTTRTSTRLHR
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgttgtgctggagacaccataccttaattcaagctctattatctcgcggccca
cttaaagatcaagactttcactccatcttctctgacgtcactggcaaatcttttgattct
aatcagaagttattcaacgattatctgcgaaagataaacatggagctgtcttatgttcag
cttgagttacgggcttgcagaaaccagtacgatggctgtgtgtattatggagtgatcaac
actgttgcagacgagcagtccaagcttggaactaaatacagcgtacctcagattgctttc
tataaggccattattgaagctatagtccaagatgccactgctcagggtactatgtgtaac
attgaagccctcaatatccggcttgaaaaccagggagcttcttcatctcaagccccacca
gcattcaagaatttctcgatgtctcagaaggagaaaactattaaagaattggttcaggac
cagtggttgtgtgataccccagatgctagaattggacttggtgttagatcatttttggat
ctccggagctggtttcatagcaatgaagttccaccatgtgatgtctgcaacgaagctgga
ataaaggcagatatgtgccgaaatgaaagttgtactgttcgaattcacaagtattgtctt
aaggcgaaattttctcaagcaaggactgaaaaggtttgcccaggttgtggcacacaatgg
ccttacgtggcagccaaagctgaagctgttgaggaagatgatacggatgatcatcagcca
cctcctgaatccttgaggcgaaagaggccaagaggttccagacaagttccagaggatgag
tcaaatggtccgtctcaggttcaaccatcttctggtccctcaaggagaaggctcagaaga
cttggaaatgatgaagatgaggagttgattggtccatctcaaggtcaaccgtcaacacaa
accttacgtagagcaaaggttgaaaaatttacagatgctgaggttgataatgctggtgcg
ggtccttcaactaggagaacaaccagaacttctactcggttacaccgttga
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