Erigeron canadensis (horseweed): 122582829
Help
Entry
122582829 CDS
T07610
Name
(RefSeq) LOW QUALITY PROTEIN: eukaryotic translation initiation factor 5B-like
KO
K03243
translation initiation factor 5B
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ecad03012
]
122582829
Translation factors [BR:
ecad03012
]
Eukaryotic type
Initiation factors
eIF-5
122582829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
GTP_EFTU_D4
GTP_EFTU_D2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
122582829
NCBI-ProteinID:
XP_043611200
LinkDB
All DBs
Position
9:33239310..33244798
Genome browser
AA seq
743 aa
AA seq
DB search
MAFQVSLGKKKGSYVDVLDDGDDVHWEQHDDRRIAAEEGERLKKEREKDKKPKPRQYANT
SKDSYSSNQLEDGVADADKAEDDDDEWDAKNWDDEDLKFPGVPRPFADEDQVMDELQPNN
LGFNHNLDDKPKQHVNKHDKQIVKEEVAEMTLRSPICCIMGHVDAGKTKLLDFIRKTNIQ
KGEAGGITQQIGATYIPADNIRERTYKLKADAKLDVPGLLVIDTPGHDSFKNLRSRGSGL
CDTAILVVSIMKGLEPQTIESLNLLRMRNTYFIVALNKVDTIYGWKTYPNIPMRDALKRQ
CQDVQAQFNYRLTQIKTQFMEQGLNTEIYYKNKDXGETYSIVPTSSISGEGIPELLLLLL
QWAQKTMVVKLTYRSEVQCTVLEVNVIEGLGTTIDVILVNGVLHEGDEIVVCGSQDPIHT
TIRSLLTPCPMKELRVKGTYIHHKEIKAAQAVKITAQNLENAVAGTSLFVARPDDDVEDL
KVSVMNDMSNVMSRTDKSGGVYVQASSLGSLEALLDYLKKPDVDIPVGGIGIGPIHKKDT
IKASLMLKKRQEFATMLAYDVDVLPEARLHADANGVKIFVGNVIYPLVDQLKAHIETFKE
EKRRQTAEEVVFPCRLQIMPNDVIRKKDPIILGVEVLEGVLKIGTPICMPKKDFIDIGHV
SFIRMNNRPVNSARIGQGVSIKIEGRNAEERQKMFGRHFNVSDELVSHISRKSIDVLKEY
YKDEMSNELWNLLVKLKILFKIQ
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggccttccaggtttctcttggtaagaagaagggtagttatgtcgacgtattggatgat
ggtgatgatgttcactgggaacagcatgatgatagaagaattgcagcagaggagggagaa
cggctgaaaaaagaacgagaaaaagacaagaagccgaagccacgtcagtatgcaaatact
agcaaagattcttattcctccaatcagctggaggacggtgttgcggatgcagacaaggct
gaagatgatgatgatgagtgggatgcaaagaactgggatgatgaagatctcaagtttcca
ggtgtaccccggccgtttgctgatgaggaccaagtcatggatgagcttcaacctaataat
ctagggtttaatcataatctggacgacaagcccaaacaacatgttaataagcatgataaa
cagattgtgaaagaagaagtcgccgagatgacacttaggtcccctatttgctgcattatg
ggtcatgttgatgctgggaaaacgaagttgcttgatttcattcgcaagactaatatccaa
aaaggtgaggccggaggaatcacccaacagattggtgccacttatattccagctgacaac
attcgtgagagaacttataagttgaaagctgatgcaaagctcgacgtccctggtctgttg
gttattgatacacctggacacgattcgttcaagaacttaaggtctcgtggttctggctta
tgtgatactgccattttggttgtcagtatcatgaaaggtttagaaccgcaaaccattgaa
tctctcaatttattgagaatgaggaacacatacttcattgtggccctaaataaggttgac
actatatacgggtggaaaacttatccgaacataccaatgagggacgcattgaagcgacag
tgccaggatgttcaagctcaattcaattataggctcactcagataaaaacacaatttatg
gagcaaggtttgaatacggaaatatactacaaaaacaaagacnngggagaaacctatagt
attgtaccgactagctctatcagtggtgaaggaataccagaattgttattgctactgctc
cagtgggctcagaagacaatggttgtaaaacttacatatcgcagtgaagttcagtgtacg
gttttggaagttaacgtcattgaaggacttggaacaaccatcgatgtgatattggtcaat
ggtgtgcttcacgaaggagatgagattgttgtttgtggctctcaggatccaattcatact
acaatccggtcattattgactccctgtccaatgaaggaacttcgtgtcaagggaacctac
attcatcacaaagaaatcaaagctgcacaagcggtcaaaattactgcacagaatcttgag
aatgcagtggctgggacctccctatttgtcgcaaggcctgatgatgacgttgaagatctc
aaagtttcagtcatgaatgatatgagtaatgtgatgagtcgcactgataaaagcggtgga
gtttacgttcaagcatcatctctgggatcactagaggcattactagactatctaaagaag
ccagatgtagacatacctgttggtggtatcggtataggaccgatacataagaaggataca
atcaaggctagcctcatgctaaagaagagacaagagtttgcgacaatgttggcttatgat
gttgacgtgctcccagaagcccgtttgcatgcagatgcgaatggtgtgaagatattcgta
ggtaacgtaatttaccccctagttgatcagttgaaggctcatattgaaactttcaaggaa
gaaaagaggagacaaaccgctgaagaggttgtatttccttgtcgtcttcaaatcatgcca
aacgacgtgatcagaaagaaagatccaatcatattgggtgtggaagttcttgagggcgtt
cttaagattggaactcccatttgcatgcctaagaaagacttcattgacattggccatgta
tctttcatcagaatgaacaacaggcctgtcaactctgcaagaataggacaaggggtgtct
atcaagatagagggaaggaacgctgaggagagacaaaaaatgttcggaaggcattttaat
gtgagtgatgaactagtgagtcacatctccaggaagtcaatcgatgttttgaaagaatat
tacaaggatgaaatgtccaatgaactatggaatctattggtcaaactgaaaatcctcttt
aaaatacagtga
DBGET
integrated database retrieval system
