Erigeron canadensis (horseweed): 122582852
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Entry
122582852 CDS
T07610
Name
(RefSeq) structural maintenance of chromosomes protein 5
KO
K22803
structural maintenance of chromosomes protein 5
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecad03400
]
122582852
DNA repair and recombination proteins [BR:
ecad03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
122582852
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_23
AAA_21
AAA_29
Prefoldin_2
AAA
ABC_tran
AAA_16
MC7
Motif
Other DBs
NCBI-GeneID:
122582852
NCBI-ProteinID:
XP_043611222
LinkDB
All DBs
Position
9:22173075..22183268
Genome browser
AA seq
1051 aa
AA seq
DB search
MGEPRRAKRPKISRGADDYLPGNIVEIEIHNFMTFNHLVCKPGSRLNLVIGPNGSGKSSL
VCAIALGLGGEPQLLGRAATIGAFVKRGEESGYTKITLRGDTLDEKIIIMRKIDARNKSD
WLYNGRQASKKEVVDIIQKFNIQVNNLTQFLPQDRVCEFAKLSPVRLLEETEKAVGDPQL
PVLHRALVDTSAELQRSEQAVEKNRETLSQQKALNAELERDVERVRQRDELLTKAEAMKK
KLPWLKYDMKKSEYLQAKEQEKDAKKKLDEAAKTLNDISQPIEKTKKEKKENDIKCKKIG
DILENVEKSRKQMLEKENQLGANVKGKYSEMEDLERQEASRQERIAKAEKDLADAELELQ
NLPPFESPKDKIERLAAEILELEASAREKRYQKKEKEKLIDRNRTSARETVEKLREMENI
KNKRLQALKNSGAERISDAYSWVQAHRHEFRKEVYGPVLTEVNISNQLHAAYLESHVPYY
MWKAFITQDSADRDYLFKNLRSFDVPVINHVADESRNPEPLHISHEMSSIGLYSRLDQVF
DAPYAVKEVLIGQAGLEHSYIGSKKSDEKADMANDFGIMDLWTPDNHYRWTRSRYGGQVS
ASVESVSDSRLLLSNTDGEELNNIRGKKDELDKTINTLEASCKSLLGEIKELEDSAAQLQ
KQRENLVNEAHHERKIRRDLEHRVNQKRLKLRSMGREEDLDTAMSKLAEEAENLNVQRFK
CVSEMKHLLTQATAYRRSYAEKFMYSVELEMKIKEMEASVKQQERLALQASLHFENCKKE
TEDRRQQLASAKRNAESVAVITPALEEEFLQMPSTIEDLNAAIQDITSQANSILFLNNNI
LEEYERRQRKIEELTAKLELDEKELTSCLEELNSLKEKWLPTLRNLVTKINETFSRNFQE
MAVAGEVSLDERGNEFDSYGILIKVKFRQTGQLQVLSAHHQSGGERSVSTILYLVSLQDL
THCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLSDLEYGEACTILT
VMNGPWIDQPSEVWKFGGSWGSVMGLIGESH
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaaccacgacgggccaaacgccccaaaatcagcaggggagcagatgattatttg
ccaggaaatattgtggaaatcgaaatccacaactttatgacatttaatcatttggtatgc
aagcctggttctcgtttgaaccttgttattgggccaaacggttctggtaaaagctccctg
gtgtgtgcaattgctcttggtctaggtggcgaacctcagcttcttgggagggctgcaact
ataggtgcatttgttaagcgtggagaggagtctggttatactaaaattaccttgagaggt
gacaccctggacgagaagattatcataatgcgtaaaattgatgctcgtaacaagtctgat
tggctatataacggcaggcaagcttctaaaaaagaggtagttgatatcatacaaaagttc
aatattcaagtcaacaatctgactcaattcttaccacaagatagggtttgtgaatttgcc
aaactctctccagtgagacttctggaagaaacagagaaggctgtaggtgatccccaactt
cctgtcttgcatcgcgctcttgttgatacgagtgctgaactgcagagatctgaacaggct
gttgagaaaaacagagaaactttaagtcagcaaaaggcacttaatgctgaactagaaaga
gatgtggagcgtgttcgtcaacgagatgaacttctaacaaaggcggaggcgatgaagaaa
aagttgccctggcttaagtatgatatgaagaagagcgagtatctccaggccaaagagcag
gagaaggatgctaagaagaagctggatgaagcagctaaaacattaaacgatatcagccaa
ccaatcgagaaaacaaagaaagaaaaaaaagaaaatgatatcaaatgtaaaaaaattgga
gacattttagaaaatgttgaaaagtcacgcaaacaaatgttggagaaagaaaatcaactg
ggtgccaatgttaaaggcaagtatagtgaaatggaggacttagagaggcaagaggcttca
cggcaggagagaattgcaaaagctgaaaaagatctagcagatgctgagttggaactgcaa
aatcttcctccttttgaatcccctaaagataaaattgaaagattagctgcggaaatattg
gagcttgaagcatctgcaagagagaaaagatatcaaaagaaagaaaaggagaagcttatt
gaccgaaataggacatcagcaagggaaactgtagaaaagttgagagaaatggaaaatata
aaaaacaaacgcttacaggcattaaaaaattctggagctgaaagaatatctgatgcttac
agttgggtgcaagcccatcgacatgaatttcggaaagaggtgtatggtcctgtgttgacg
gaggtcaatatctcaaatcagcttcatgctgcctacttagagagtcatgttccatattac
atgtggaaggcttttatcacccaggattctgctgaccgtgattatttattcaagaacctt
aggtcatttgatgttccagttataaatcatgtggctgatgaaagtcgcaatccagaacca
ctgcatatatctcatgagatgtcctccatcggtctatattctaggcttgaccaagttttt
gatgctccatatgcagtcaaagaggtcttgattgggcaagctggtctagaacattcttac
atagggtctaaaaagagtgatgaaaaggctgacatggccaatgattttggaataatggat
ctttggactcctgacaatcattatcgctggactagatctagatatggtggtcaggtttca
gcatctgtggaatcagtgagtgattcccggcttcttttatccaatacggatggcgaggag
ttgaataatataaggggaaagaaggatgaattggataagacaatcaatactctagaagca
agttgtaagtccctactgggcgagataaaggaactagaagattcggcagctcagctgcag
aaacaacgtgagaatcttgttaatgaagcacaccatgaaagaaaaattaggcgtgatctt
gaacatcgagttaaccaaaaaaggttaaaattgagatctatgggaagagaagaggacttg
gatactgcaatgtcaaagctagctgaagaagctgagaacctaaatgttcagaggttcaaa
tgtgtatcggagatgaagcatctactcactcaagctactgcttacagaagaagttatgct
gaaaagttcatgtactcagttgaacttgagatgaagatcaaagagatggaagcaagtgtc
aaacaacaagaaagacttgcgctgcaagcttcattacattttgaaaactgtaaaaaagag
acggaggaccgtcggcaacagttggcatccgcaaagagaaatgcagaatcagttgcagtc
attactccagctcttgaagaagaatttctacagatgccttctaccattgaggacttgaat
gctgcaattcaagatattacatctcaagccaattctattctctttttgaacaacaacatt
ttggaggaatatgaacgtcgtcagagaaaaattgaggagctcacagcgaagttggaatta
gacgagaaagaattgaccagttgtttagaagaattgaatagtttgaaggagaaatggctt
ccaacacttagaaacctagttactaaaataaatgagacattcagcaggaattttcaagaa
atggctgttgcaggagaagtttcattggatgaacgtggaaatgaattcgacagctatggt
attcttatcaaagtgaagttcaggcaaaccggacaacttcaagttctaagtgctcaccac
cagtctggaggggagcgctcggtgtcaaccattctgtatcttgtttcattacaagacttg
acgcactgcccgtttagggttgtcgatgagataaaccaaggaatggaccctattaatgaa
agaaaaatgttccagcagttagtcagagccgcgagccaacctaatacaccacagtgtttc
ttgcttacaccaaaactgctatccgatttagaatatggcgaggcctgtacaattctgact
gtaatgaatggtccatggatcgaccaaccctcggaagtttggaaatttggaggaagttgg
ggttctgttatggggttaataggagaaagccattga
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