Erigeron canadensis (horseweed): 122583030
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Entry
122583030 CDS
T07610
Name
(RefSeq) fanconi-associated nuclease 1 homolog
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
122583030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecad03400
]
122583030
Enzymes [BR:
ecad01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
122583030
DNA repair and recombination proteins [BR:
ecad03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
122583030
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VRR_NUC
HIRAN
FAN1_HTH
FAN1_TPR
RNF220
Sgf11
Motif
Other DBs
NCBI-GeneID:
122583030
NCBI-ProteinID:
XP_043611402
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All DBs
Position
9:29073711..29083166
Genome browser
AA seq
976 aa
AA seq
DB search
MQIRAKSNNNNNNRTALTGRESLIRLIGKRRRFLPNRQSLLSAPIQVFSGAVKDENGVKG
GDLVVAEEGICGNGNKVGSLGVEKVSCPVCGNKIRGEEYTINSHLDACLKRGTKRKLSQQ
TLLQFCSRSKSPVSLTNLDDTKTNSNSDNDVTGSREVGIEETDDIMSETSSSPDSVPLVH
TDVSAETSVFEDIVTMGVITEINDGKVNSPSLIPEIEVCETDSPNSDDEISGKLLATFIV
GRRFSELEELHAEDKIYLCRDPENTKDPNAVKVLSSESGCSKMLGYIPRELAEHLSKLMD
IFGLRFEGCIVLVPEHSHAAVPIQIWCREKISTTELECEKVQVFKSLCRHVISAASLSEA
FPLGMVKYQHNFCLLLQEVLRTAPHVFTFEEKTFLEKFLLLSNDSQRLFIRLYTRKGPWF
RMSNISYAEILDYQLSVKELSEAGYVCFVETISELHEDDLEGILNVLTVGELRELLSVID
KKRSHTSRKQDSISSLLSAFGNGSRLLLNKMVLEKTGSFIRISLAADSLIWRVERLFFCN
GEQDLSAFLLVDMGIVKYPTYNCVVTDQIFSSRNDLLSYEEALEVAQVMDESLEEDDSSM
VLRCIAVSDSRISTSAKERMQFSTSKQLSAPFPCFSSLWIYSKVVLLGVSFLESERRYND
AIELLKHLLLNFADDRRRGYWTLRLSIDLEHLGRVSESLSVAEVGLEDPWVRAGSRISLQ
RRVLRLGRPPRRWKVPSFSESVKRKIPEVHVHGRPLNCKTGTKSRFYGEDGEQCGVEQLA
LQYYAGEQGGEWQGVHSESGIWLTVFGLLMWDVIFADMPNVFLTRFQTSPLDLDTDYFYE
ARKSIIEPLLVKIQEGMAEEILITSWESHLGTSCQGVNWNRHSLTELRAVVSCIGGGCLA
SICRHLAQDYRSWSSGMPDLLLWRFHSDYSGEAKLVEVKGPRDRLSEQQRAWLLFFMDSG
FNAEVCRVNPPIPETK
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattagggcaaaatcaaacaataataacaataatcgaaccgcactcaccggccgt
gaaagcttaatccgattaatcgggaaacgccgccgattcctccccaatcgccaatccctt
ttatctgctcccattcaggtattttcgggtgcggtgaaagatgaaaatggagtaaaaggg
ggagatttagtagtagcagaggaaggtatttgtggaaatggaaataaggttgggagtttg
ggcgttgagaaggttagttgtccggtttgcggaaataagattcgaggtgaagagtatacg
attaactctcatttagatgcatgtttaaagagaggaacgaaacggaagttaagccagcag
acgcttcttcagttctgttctagatccaaatctcctgtttcacttaccaatttagatgac
acaaagacaaactcaaatagtgataatgacgtaactggttcaagagaagtaggtattgag
gaaaccgacgatatcatgtctgagacatcttcaagtccagacagtgttccgcttgtgcat
acagatgtttcagcagaaacctcagtgtttgaggacatagttaccatgggtgttataact
gaaattaatgatgggaaggtcaactccccttcactgatccctgaaattgaggtctgtgaa
actgacagccccaattcagatgatgaaatatctggaaagttgcttgcaaccttcattgtt
ggccgaaggttcagtgaattagaagaattacacgcagaagataaaatatatctttgtcga
gatcctgaaaataccaaggaccctaatgccgttaaggttctttcttcagaatctggatgc
agcaaaatgcttggttatatacctcgagagctagctgaacatttgtcgaagttaatggat
atatttggcttgagatttgagggttgtattgtgttggttcctgaacattctcatgctgct
gtcccaattcagatttggtgtcgggagaaaatttctactactgaattagaatgtgaaaaa
gttcaggttttcaagtcgttgtgtcgacatgttataagcgctgccagtttaagtgaggca
ttcccccttggcatggttaagtaccaacataatttttgtctgctgctacaagaggttcta
agaaccgctcctcatgttttcacatttgaagaaaagacgtttttagaaaaatttctcttg
ctttctaatgatagtcaaaggctctttattcgtctttatacacggaaagggccatggttt
cggatgtctaatatttcttatgctgaaatactggactatcaactttcagtgaaggaactc
tcggaagcaggttatgtttgtttcgttgaaaccataagtgagttacatgaagatgatttg
gaagggatcttgaatgttcttactgttggtgaactgcgtgaattgttatcagtaattgat
aagaaacgtagtcacacttcacgaaagcaggattccatatcctcacttctttctgcattt
gggaatggatcaaggttactgctaaataaaatggtattggagaaaacaggctcctttatt
cgtatttctttagcagctgactccctaatttggcgtgttgagaggcttttcttctgtaat
ggagagcaagatctgtcagcatttttactcgtggatatgggaattgtgaaatatccaact
tacaattgtgttgtcactgaccagatattttccagccggaatgatctactatcttatgaa
gaggctcttgaagtggcacaggtcatggatgaatctcttgaagaagatgattcatcaatg
gtcttgagatgtattgcagtatctgactctcgcatatccacttctgccaaagaaagaatg
caattctcaacctctaaacaattgtctgcaccctttccatgcttttcatctttatggatc
tactccaaggtggttctgttaggtgtttcttttcttgagtctgaacgtaggtacaatgat
gcgatagagttacttaagcaccttttgcttaattttgctgatgatagaagaaggggttat
tggacactgagactgtccattgatttggaacatctgggtcgtgtcagtgagagcctgtct
gttgctgaagttggtttagaggatccatgggttcgtgctggttcaagaatatcattgcaa
aggcgagtacttcgactgggaagacctccaagacgctggaaagttccaagcttttcagag
tctgttaaaaggaagatccctgaggttcatgttcacggtaggccactcaactgcaaaact
gggaccaagagccggttttatggtgaagatggagaacaatgtggggtagagcagcttgct
ttgcagtattatgcgggagaacaaggaggtgaatggcaaggcgttcattcagaaagtggc
atttggctgactgttttcggacttcttatgtgggatgtcatctttgcagatatgccaaat
gtctttcttaccagatttcagacatcacccttagatttagacactgattacttttatgaa
gctaggaaaagcattatagaacctctactagtaaagattcaggaaggcatggctgaggaa
atccttataacttcgtgggagtcccatttgggaacatcatgtcaaggtgttaactggaac
cgacattcattaactgaacttcgagcggttgtgtcatgtataggtggcggttgtctggct
tccatttgtcgacacctggcacaagattacaggagttggtctagtggcatgccagatctg
ctgttgtggcgtttccactcagattatagtggtgaggccaagctcgttgaagtcaaaggc
ccccgtgatcgtctttctgaacaacaacgtgcatggcttttgttctttatggattctgga
ttcaatgctgaggtttgcagggtgaatcctcctattcccgaaaccaaataa
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