Erigeron canadensis (horseweed): 122583485
Help
Entry
122583485 CDS
T07610
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 2-like
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
122583485
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ecad01002
]
122583485
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122583485
Enzymes [BR:
ecad01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122583485
Peptidases and inhibitors [BR:
ecad01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
122583485
Ubiquitin system [BR:
ecad04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
122583485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
122583485
NCBI-ProteinID:
XP_043611818
LinkDB
All DBs
Position
9:complement(28485455..28489069)
Genome browser
AA seq
927 aa
AA seq
DB search
MAKKVNKRAAHNTQKEKRFPTSSLQAVLQEIVLAKEAHICPHLDKGTNLEKFSKRILSPE
SLISVTCDYCLHDMANRKITKRKDKSGKNKGNLSKSESNLLWVCLECGHFSCSDAGFLIT
PQSHTTRHAKEYRHPLFLKFSYPDLRYCFSCNTSIPVQWSDKNGELEDVLSEFVKLVKPL
LLPKTRVVEAILHRTSSITPHVDLVNTLQNCLEGRNGGYMVKGLVNLGNTCFLNSVLQNL
LAVHKLREYLLKLEGLVGPITASLKKLFVEMSSSTGTCNVINPRSFFGCFCTKASQFKGF
QQHDSHELLRCLLDELCSEESRVQTHSQDGSGNANHASTFVDTLFGGQVSSTVSCLECGH
SSVVYEPYLDLSLPLPTKRSSSKKTPPVAGSKKSVFFSNRKGKIFAKPEKASDSLVGNGV
TSVLNSDDSSGATQSMETSGGKNAVFLCDSTHSGSVLLDAIGDKNDSSLQDEIHQMDSTV
ALVESLVQRYYGEPVSLFNGYDKYTASSSNAFSLECSMPTMPYNGHDTTCEQLDSFDSKE
ASWMDYRRLGKSVIEDTTSPKQDLLLIQDSENSDDDLSDDEPLAIAHESLLPCKETVSTC
VQEPSDFNGSGYLFCERKPVFGPTMNPLFNRIKGSESDPDEVDDTDSPVSVEKCLAYFTT
PELLTQKEHAWECGQCSKTLLEQKTILKNKLKKFNLNGYNNEISIASSVLGTDYLHFNGF
ENHNNQSTAGVDDSDENLAFCNGMSDSYQDTESCNINGFTDISETENSEQKESELQVSQH
ESDSSDDDEVGSKGVKVVRDASKRILISKAPPVLTIHLKRFCQDACGRLRKLNGHVNFSD
TFDLKPYMDPSCCRDKEYKYQLVGVVVHSGTMRGGHYVAYVRGAKGSTGTKDDDNGLWYY
ASDANVREVSLDEVLRCDAYILFYEEM
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaaaggttaataagagggcagcccacaatactcaaaaggagaagcggtttcca
acctcttctctccaagcagttttacaagagatcgttctagctaaagaggcacatatatgt
ccacatctcgataagggcactaatttggaaaagttttccaaaagaatattgtcgcctgag
tctcttatttcagtgacatgtgactattgtttgcacgacatggccaataggaagataaca
aagagaaaagacaagtctggaaagaataaaggaaatctttccaaatccgagtccaatttg
ttatgggtatgtttggaatgtggacatttttcgtgcagtgatgcggggttccttatcaca
cctcagagtcatacaactcggcatgcaaaggagtaccgccatccgttgtttttgaaattt
tcataccctgatcttagatattgtttctcttgtaatacctctatcccagttcaatggtca
gacaagaatggagaactagaagatgttttgtcagaatttgttaaattagtaaaaccacta
ttattgccaaaaactcgtgtagttgaggcaattctgcatcgaactagtagtattacacct
catgttgatttagtaaatacccttcaaaactgcttagaaggtagaaatggcggctatatg
gtaaaaggtttggtaaatttagggaacacttgcttcttaaattcagtgttgcaaaatctt
ctggcagtgcataaattacgggaatacctcttgaaactggagggattagttgggcccatc
acagcatctttgaagaagctttttgttgaaatgagctcatcgacgggtacctgcaatgtc
atcaacccgagatcctttttcggttgtttttgtaccaaggcttcccaattcaagggattt
caacagcatgatagtcatgagttgcttcgttgtttgcttgacgaattgtgtagtgaggag
tctcgtgtacaaacacattcccaagatggcagtgggaatgcaaaccatgcttctactttt
gtagataccttatttgggggacaagtttctagcacggtcagttgtttagaatgtggacat
tcttcagttgtatatgagccatatttagacctttcattaccattaccgaccaagagatct
tcgtctaaaaagaccccaccagttgctggatccaagaaatcagtatttttttctaacagg
aaaggaaagatttttgcaaaacctgaaaaagcttcagattccttggtaggcaacggtgtt
acaagtgttttaaacagtgatgactcgtctggagccacacagtctatggaaacatccggc
ggaaagaatgctgtttttttatgtgattcaacacattcaggatctgttctccttgatgcc
atcggtgataaaaatgattcatccctacaggatgaaatccaccagatggacagtactgta
gctttagtagaaagtttagttcaacgttactacggtgaaccagtctctttgttcaatggt
tatgataagtacactgcaagttcatcaaatgctttctcactcgaatgtagtatgcccact
atgccatataatggtcatgatacaacttgtgagcagcttgactcttttgattcaaaggaa
gcatcatggatggattatcgtagactaggtaaatctgtcattgaagatacaacatcacct
aagcaagatttgttactgattcaagattctgaaaatagtgatgatgacttatcggatgac
gagcctctggcaatagctcacgaatctttgcttccttgcaaggaaaccgtctcaacatgt
gtacaagaaccgtcagattttaatggatctggatatctgttttgtgaacgcaagcctgtt
tttgggcccactatgaatcccttatttaacagaattaaaggaagtgagtctgatcctgat
gaggttgatgatactgattctcctgtgtccgtggagaaatgtttggcttatttcactacc
cctgagcttctcacacaaaaggaacatgcctgggagtgtggtcaatgttccaagaccttg
ttagagcaaaagacaatactaaagaacaaactgaaaaagttcaatttgaatgggtataat
aatgaaatttcaattgcttcatcggttttgggcaccgattacttgcattttaacggtttt
gaaaaccataacaatcaaagtactgcaggggttgacgattctgatgaaaacttggcattt
tgtaatggaatgagtgatagctatcaggatactgaatcttgcaacatcaacgggtttact
gatatatctgagactgagaacagtgagcaaaaggaatctgagcttcaagtgagtcaacat
gaatctgatagtagtgatgatgacgaggtgggctctaagggtgtgaaggtggttagggat
gcatctaagagaattctgatcagtaaggccccaccagttttgactatccatttgaaaaga
ttctgccaagatgcctgtggtcgtttacgtaaactaaatggtcatgtcaactttagtgat
acatttgatcttaaaccctacatggaccccagctgctgcagagataaagagtataaatat
caactagtaggagtggtggtgcattcaggaacaatgagaggaggccattatgtggcttac
gtcagaggtgcaaagggttctacagggacaaaagatgatgacaatggcttatggtactat
gcaagtgatgctaatgttcgcgaggtttctttggatgaagttcttcggtgcgacgcctat
atcttattttatgaagaaatgtga
DBGET
integrated database retrieval system
