Erigeron canadensis (horseweed): 122583778
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Entry
122583778 CDS
T07610
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00040
Pentose and glucuronate interconversions
ecad01100
Metabolic pathways
Module
ecad_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122583778
Enzymes [BR:
ecad01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
122583778
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
122583778
NCBI-ProteinID:
XP_043612087
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Position
9:37527290..37529991
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AA seq
376 aa
AA seq
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MQYGAKGDGNADDTKAFERAWQGVCNDDGQRSTLTIPLGKTFLVGPVNFQGPCKSPVIHF
QIRGMVIAPEDPNSWNGCETGVWLLFSNVNGLIMDGGGMINGRGRAWWTKSYLTYDIKNA
FKCAVPPSALHFENCNGLRLSQLKHRDSPRNHIGLSRCNNASLSHLDILAPASSPNTDGI
DISISTQIRIQHSVIKTGDDCIALSNGSSQIDITGIDCGPGHGISIGSLGMNGEYSTVEG
VYVRKCNFSGTQNGARIKTWQGGSGYARDITFEQINLHKVYNPILIDQYYCPGKHNCPKG
SSGVNISDISYKLFQGTSISRTALNFDCSSNVPCSGISLDRINITSAVNTQHTIAYCNNA
YGTSSFTEPSATCLSH
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgcagtatggcgctaaaggtgatggcaatgccgacgatacaaaggcttttgaaagagct
tggcaaggtgtatgtaatgatgacggacaaaggtcaacattaactatcccattaggcaaa
actttcctagtgggcccagtaaactttcaaggcccatgcaagtcccctgttatccatttc
cagatacgtggtatggttatcgccccagaagaccctaactcatggaacggctgtgaaacc
ggggtatggctactattttcgaatgtcaacggtctaattatggatggtggtggtatgatc
aacggtcgtggtcgcgcttggtggaccaaatcttatttgacctatgatatcaaaaatgca
ttcaaatgtgctgtgccaccatcggcattgcattttgaaaattgcaatggtctacgacta
agccaacttaagcatcgggacagccctagaaaccatattggtctatccagatgcaataat
gcgagcctctcacatttagacatacttgcacctgcaagtagcccaaatacggatggtata
gacatatcaatctcaacccaaatacgaattcaacattcagtgatcaaaactggtgatgat
tgtatagccctaagcaatggatcatctcaaatcgatattactggcatagattgcgggccg
ggccatggtataagtatcggaagcttgggcatgaatggggaatatagtacagtagaaggt
gtatatgtgcgaaaatgcaatttttctggaacacaaaatggagcaagaatcaaaacatgg
cagggaggttcggggtatgctagagatatcacattcgagcagatcaatcttcacaaagtg
tataacccaattctcattgatcaatactattgccctggcaaacataattgtcctaaaggg
tcgtcgggggttaacattagtgacataagctacaagctatttcaagggacatcaatttct
cgaaccgcattaaatttcgattgcagcagcaacgtaccatgctctggcatatctttggat
cggataaacataacatccgctgtgaacacacaacacacgattgcgtattgcaataatgcg
tacgggacaagttctttcacagaacctagtgcaacctgtttgtcacactag
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